PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Potra000178g00684.1 Rosmarinic Acid RAS medium pass
Potra000178g00684.2 Rosmarinic Acid RAS medium pass
Potra000178g00684.3 Rosmarinic Acid RAS medium pass
Potra000178g00684.4 Rosmarinic Acid RAS medium pass
Potra000235g00937.1 Rosmarinic Acid RAS medium pass
Potra000359g01452.1 Rosmarinic Acid RAS medium pass
Potra000408g01988.1 Rosmarinic Acid RAS medium pass
Potra000599g04558.1 Rosmarinic Acid RAS medium pass
Potra000625g04752.1 Rosmarinic Acid RAS low borderline
Potra000747g05887.1 Rosmarinic Acid RAS low borderline
Potra000747g05887.2 Rosmarinic Acid RAS low borderline
Potra000958g07861.1 Rosmarinic Acid RAS low borderline
Potra000958g07861.2 Rosmarinic Acid RAS low borderline
Potra000958g07861.3 Rosmarinic Acid RAS low borderline
Potra000975g08077.1 Rosmarinic Acid RAS low borderline
Potra000975g08077.2 Rosmarinic Acid RAS low borderline
Potra000975g08077.3 Rosmarinic Acid RAS low borderline
Potra001111g09750.1 Rosmarinic Acid RAS low borderline
Potra001111g09750.2 Rosmarinic Acid RAS low borderline
Potra001111g09750.3 Rosmarinic Acid RAS low borderline
Potra001111g09750.4 Rosmarinic Acid RAS low borderline
Potra001253g10789.1 Rosmarinic Acid RAS low borderline
Potra001253g10789.2 Rosmarinic Acid RAS low borderline
Potra001327g11402.1 Rosmarinic Acid RAS low borderline
Potra001361g11641.1 Rosmarinic Acid RAS low borderline
Potra001361g11641.2 Rosmarinic Acid RAS low borderline
Potra001534g12735.1 Rosmarinic Acid RAS medium pass
Potra001534g12735.2 Rosmarinic Acid RAS medium pass
Potra001534g12735.3 Rosmarinic Acid RAS medium pass
Potra001735g14136.4 Rosmarinic Acid RAS low borderline
Potra001771g14391.1 Rosmarinic Acid RAS low borderline
Potra002053g16020.1 Rosmarinic Acid RAS low borderline
Potra002433g18465.1 Rosmarinic Acid RAS low borderline
Potra002576g19378.1 Rosmarinic Acid RAS low borderline
Potra003138g20827.1 Rosmarinic Acid RAS low borderline
Potra003213g21015.1 Rosmarinic Acid RAS low borderline
Potra003606g22161.1 Rosmarinic Acid RAS low borderline
Potra003606g22161.2 Rosmarinic Acid RAS low borderline
Potra003606g22161.3 Rosmarinic Acid RAS low borderline
Potra003606g22161.4 Rosmarinic Acid RAS low borderline
Potra003606g22161.5 Rosmarinic Acid RAS low borderline
Potra003606g22161.6 Rosmarinic Acid RAS low borderline
Potra003606g22161.7 Rosmarinic Acid RAS low borderline
Potra003736g22631.1 Rosmarinic Acid RAS low borderline
Potra003736g22631.2 Rosmarinic Acid RAS low borderline
Potra003736g22631.3 Rosmarinic Acid RAS low borderline
Potra003736g22631.4 Rosmarinic Acid RAS low borderline
Potra003736g22631.5 Rosmarinic Acid RAS low borderline
Potra003895g23390.1 Rosmarinic Acid RAS low borderline
Potra003935g23620.1 Rosmarinic Acid RAS medium pass