PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Potra001094g09520.1 Alkaloid T3O low borderline
Potra001102g09616.1 Alkaloid T3O medium borderline
Potra001118g09882.1 Alkaloid T3O low borderline
Potra001196g10348.1 Alkaloid T3O medium pass
Potra001196g10348.2 Alkaloid T3O medium pass
Potra001228g10562.1 Alkaloid T3O low borderline
Potra001274g11006.1 Alkaloid T3O low borderline
Potra001274g11009.1 Alkaloid T3O medium borderline
Potra001274g11009.2 Alkaloid T3O medium borderline
Potra001334g11457.1 Alkaloid T3O medium pass
Potra001357g11626.1 Alkaloid T3O low borderline
Potra001421g12025.1 Alkaloid T3O medium pass
Potra001479g12375.1 Alkaloid T3O medium borderline
Potra001585g13101.1 Alkaloid T3O medium pass
Potra001603g13217.1 Alkaloid T3O medium borderline
Potra001603g13217.2 Alkaloid T3O medium borderline
Potra001613g13292.1 Alkaloid T3O medium pass
Potra001613g13292.2 Alkaloid T3O medium pass
Potra001620g13330.1 Alkaloid T3O low borderline
Potra001647g13503.1 Alkaloid T3O medium borderline
Potra001762g14330.1 Alkaloid T3O medium pass
Potra001794g14551.1 Alkaloid T3O medium borderline
Potra001794g14551.2 Alkaloid T3O medium borderline
Potra001801g14583.1 Alkaloid T3O medium pass
Potra001813g14649.1 Alkaloid T3O medium borderline
Potra001907g15129.1 Alkaloid T3O medium borderline
Potra001965g15510.1 Alkaloid T3O medium borderline
Potra001965g15510.2 Alkaloid T3O medium borderline
Potra001965g15511.1 Alkaloid T3O medium borderline
Potra001965g15513.1 Alkaloid T3O medium borderline
Potra002011g15767.4 Alkaloid T3O low borderline
Potra002021g15846.1 Alkaloid T3O medium pass
Potra002099g16332.1 Alkaloid T3O medium borderline
Potra002099g16332.2 Alkaloid T3O medium borderline
Potra002118g16447.1 Alkaloid T3O medium pass
Potra002122g16460.1 Alkaloid T3O medium borderline
Potra002129g16502.1 Alkaloid T3O low borderline
Potra002139g16572.1 Alkaloid T3O medium borderline
Potra002140g16581.1 Alkaloid T3O medium borderline
Potra002148g16622.1 Alkaloid T3O low borderline
Potra002169g16741.5 Alkaloid T3O low borderline
Potra002169g16741.6 Alkaloid T3O low borderline
Potra002169g16741.8 Alkaloid T3O low borderline
Potra002265g17375.1 Alkaloid T3O medium borderline
Potra002311g17626.1 Alkaloid T3O medium borderline
Potra002322g17764.1 Alkaloid T3O medium borderline
Potra002334g17841.1 Alkaloid T3O low borderline
Potra002377g18113.1 Alkaloid T3O medium borderline
Potra002461g18651.1 Alkaloid T3O low borderline
Potra002497g18861.3 Alkaloid T3O low borderline