PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Protein/Isoform Record Pathway Family Confidence Status
Potra009323g26336.2 Alkaloid T3O medium pass
Potra009707g26415.1 Alkaloid T3O medium pass
Potra009997g26466.1 Alkaloid T3O medium borderline
Potra010159g26509.1 Alkaloid T3O medium pass
Potra010159g26509.2 Alkaloid T3O medium pass
Potra152267g26705.1 Alkaloid T3O low borderline
Potra155375g35590.1 Alkaloid T3O medium pass
Potra162064g26995.1 Alkaloid T3O medium borderline
Potra163031g27057.1 Alkaloid T3O medium borderline
Potra163222g27078.1 Alkaloid T3O medium borderline
Potra163222g27078.2 Alkaloid T3O medium borderline
Potra168027g27333.1 Alkaloid T3O medium pass
Potra170669g27536.1 Alkaloid T3O medium borderline
Potra170669g27536.2 Alkaloid T3O medium borderline
Potra173180g27633.1 Alkaloid T3O medium borderline
Potra174312g27711.1 Alkaloid T3O low borderline
Potra179359g28012.1 Alkaloid T3O medium borderline
Potra186200g28419.1 Alkaloid T3O medium pass
Potra187320g28496.1 Alkaloid T3O medium borderline
Potra188390g31423.1 Alkaloid T3O low borderline
Potra189406g28681.1 Alkaloid T3O medium borderline
Potra194782g28983.1 Alkaloid T3O medium borderline
Potra197415g29223.1 Alkaloid T3O medium borderline
Potra198289g29301.1 Alkaloid T3O medium pass
Potra198289g29301.2 Alkaloid T3O medium pass
Potra198923g29364.1 Alkaloid T3O medium borderline
Potra198923g29364.2 Alkaloid T3O medium borderline
Potra200149g29472.1 Alkaloid T3O medium pass
Potra200545g29519.1 Alkaloid T3O medium borderline
Potra200545g29519.2 Alkaloid T3O medium borderline
Potra200545g29519.3 Alkaloid T3O medium borderline
Potra200545g29519.4 Alkaloid T3O medium borderline