PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TAT
Reset
Gene Pathway Family Confidence Status
Potra000418g02135.1 Rosmarinic Acid TAT medium pass
Potra000418g02135.2 Rosmarinic Acid TAT medium pass
Potra000418g02135.3 Rosmarinic Acid TAT medium pass
Potra000418g02136.1 Rosmarinic Acid TAT medium pass
Potra000418g02136.2 Rosmarinic Acid TAT medium pass
Potra000418g02136.3 Rosmarinic Acid TAT medium pass
Potra000418g02136.4 Rosmarinic Acid TAT medium pass
Potra000418g02136.5 Rosmarinic Acid TAT medium pass
Potra000418g02136.6 Rosmarinic Acid TAT medium pass
Potra000418g02136.7 Rosmarinic Acid TAT medium pass
Potra000419g02170.1 Rosmarinic Acid TAT low borderline
Potra000419g02170.2 Rosmarinic Acid TAT low borderline
Potra000419g02170.3 Rosmarinic Acid TAT low borderline
Potra000426g02246.1 Rosmarinic Acid TAT low borderline
Potra000445g02484.1 Rosmarinic Acid TAT medium pass
Potra000687g05337.1 Rosmarinic Acid TAT low borderline
Potra000712g05571.1 Rosmarinic Acid TAT medium pass
Potra000712g05571.2 Rosmarinic Acid TAT medium pass
Potra000712g05571.3 Rosmarinic Acid TAT medium pass
Potra000712g05571.4 Rosmarinic Acid TAT medium pass
Potra000712g05571.5 Rosmarinic Acid TAT medium pass
Potra000740g33283.1 Rosmarinic Acid TAT medium pass
Potra000740g33286.1 Rosmarinic Acid TAT medium pass
Potra000780g06151.1 Rosmarinic Acid TAT low borderline
Potra000780g06151.2 Rosmarinic Acid TAT low borderline
Potra000808g06413.1 Rosmarinic Acid TAT medium pass
Potra000808g33367.1 Rosmarinic Acid TAT medium pass
Potra000808g33370.1 Rosmarinic Acid TAT medium pass
Potra000973g08057.1 Rosmarinic Acid TAT low borderline
Potra001089g09468.1 Rosmarinic Acid TAT low borderline
Potra001089g09468.2 Rosmarinic Acid TAT low borderline
Potra001117g09830.1 Rosmarinic Acid TAT medium pass
Potra001326g11396.1 Rosmarinic Acid TAT medium pass
Potra001326g11396.2 Rosmarinic Acid TAT medium pass
Potra001328g11412.1 Rosmarinic Acid TAT medium pass
Potra001328g11412.2 Rosmarinic Acid TAT medium pass
Potra001540g12775.1 Rosmarinic Acid TAT medium pass
Potra001540g12775.2 Rosmarinic Acid TAT medium pass
Potra001540g12776.1 Rosmarinic Acid TAT medium pass
Potra001540g12776.2 Rosmarinic Acid TAT medium pass
Potra001540g12776.3 Rosmarinic Acid TAT medium pass
Potra001540g12776.4 Rosmarinic Acid TAT medium pass
Potra001654g13573.1 Rosmarinic Acid TAT low borderline
Potra001827g14724.1 Rosmarinic Acid TAT low borderline
Potra002555g19243.1 Rosmarinic Acid TAT low borderline
Potra003085g20704.1 Rosmarinic Acid TAT low borderline
Potra003566g32261.1 Rosmarinic Acid TAT low borderline
Potra004309g24799.1 Rosmarinic Acid TAT medium pass
Potra004309g24799.2 Rosmarinic Acid TAT medium pass
Potra004552g32678.1 Rosmarinic Acid TAT medium pass