PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Potra000022g00107.1 Flavonoid UFGT medium pass
Potra000037g00184.3 Flavonoid UFGT medium pass
Potra000324g32132.1 Flavonoid UFGT medium pass
Potra000329g01152.1 Flavonoid UFGT medium pass
Potra000346g01227.1 Flavonoid UFGT medium pass
Potra000352g01299.1 Flavonoid UFGT medium pass
Potra000352g01300.1 Flavonoid UFGT medium pass
Potra000414g02059.1 Flavonoid UFGT medium pass
Potra000414g02059.2 Flavonoid UFGT high pass
Potra000457g32684.1 Flavonoid UFGT medium pass
Potra000464g02726.1 Flavonoid UFGT medium pass
Potra000492g03133.1 Flavonoid UFGT high pass
Potra000501g03230.1 Flavonoid UFGT medium pass
Potra000501g03230.2 Flavonoid UFGT medium pass
Potra000501g03230.3 Flavonoid UFGT medium pass
Potra000512g03375.1 Flavonoid UFGT medium pass
Potra000630g04817.1 Flavonoid UFGT medium pass
Potra000686g05317.1 Flavonoid UFGT high pass
Potra000686g05318.1 Flavonoid UFGT medium pass
Potra000686g05323.1 Flavonoid UFGT medium pass
Potra000686g33188.1 Flavonoid UFGT low borderline
Potra000686g33189.1 Flavonoid UFGT low borderline
Potra000704g05507.1 Flavonoid UFGT high pass
Potra000710g05558.1 Flavonoid UFGT low borderline
Potra000710g05558.2 Flavonoid UFGT low borderline
Potra000710g05558.3 Flavonoid UFGT low borderline
Potra000737g05809.1 Flavonoid UFGT medium pass
Potra000763g06034.1 Flavonoid UFGT medium pass
Potra000763g33319.1 Flavonoid UFGT medium pass
Potra000809g06443.1 Flavonoid UFGT high pass
Potra000824g06572.1 Flavonoid UFGT medium pass
Potra000853g06909.1 Flavonoid UFGT high pass
Potra000857g06938.1 Flavonoid UFGT high pass
Potra000857g06938.2 Flavonoid UFGT high pass
Potra000887g07160.1 Flavonoid UFGT low borderline
Potra000887g07161.1 Flavonoid UFGT high pass
Potra000948g07769.1 Flavonoid UFGT low borderline
Potra000948g33551.1 Flavonoid UFGT low borderline
Potra000963g07916.1 Flavonoid UFGT low borderline
Potra000963g07916.2 Flavonoid UFGT low borderline
Potra000963g07916.3 Flavonoid UFGT low borderline
Potra000963g07916.4 Flavonoid UFGT low borderline
Potra000975g08081.1 Flavonoid UFGT high pass
Potra001008g08387.1 Flavonoid UFGT high pass
Potra001020g08514.1 Flavonoid UFGT high pass
Potra001020g08523.1 Flavonoid UFGT medium pass
Potra001020g08523.2 Flavonoid UFGT medium pass
Potra001020g08524.1 Flavonoid UFGT medium pass
Potra001020g08525.1 Flavonoid UFGT high pass
Potra001053g08999.1 Flavonoid UFGT medium pass