PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Potra001110g09740.1 Flavonoid UFGT low borderline
Potra001116g09823.1 Flavonoid UFGT medium pass
Potra001117g09832.1 Flavonoid UFGT medium pass
Potra001117g09832.2 Flavonoid UFGT medium pass
Potra001117g09848.1 Flavonoid UFGT medium pass
Potra001117g09848.2 Flavonoid UFGT medium pass
Potra001145g09981.1 Flavonoid UFGT medium pass
Potra001264g10915.1 Flavonoid UFGT high pass
Potra001264g10917.1 Flavonoid UFGT high pass
Potra001264g10918.1 Flavonoid UFGT medium pass
Potra001381g11785.1 Flavonoid UFGT high pass
Potra001441g12116.1 Flavonoid UFGT medium pass
Potra001441g12116.2 Flavonoid UFGT medium pass
Potra001441g12117.1 Flavonoid UFGT low borderline
Potra001509g12588.1 Flavonoid UFGT medium pass
Potra001509g12588.2 Flavonoid UFGT medium pass
Potra001607g13242.1 Flavonoid UFGT medium pass
Potra001607g13247.1 Flavonoid UFGT medium pass
Potra001607g13247.2 Flavonoid UFGT medium pass
Potra001627g13389.1 Flavonoid UFGT medium pass
Potra001659g13622.1 Flavonoid UFGT medium pass
Potra001659g13622.2 Flavonoid UFGT medium pass
Potra001659g13623.1 Flavonoid UFGT high pass
Potra001720g13996.1 Flavonoid UFGT high pass
Potra001774g14451.1 Flavonoid UFGT medium pass
Potra001781g14493.1 Flavonoid UFGT high pass
Potra001781g14495.1 Flavonoid UFGT medium pass
Potra001781g14495.2 Flavonoid UFGT high pass
Potra001781g14495.3 Flavonoid UFGT high pass
Potra001781g14495.4 Flavonoid UFGT high pass
Potra001908g15140.1 Flavonoid UFGT high pass
Potra001908g15140.2 Flavonoid UFGT high pass
Potra002035g15908.1 Flavonoid UFGT high pass
Potra002078g16190.1 Flavonoid UFGT medium pass
Potra002078g34126.1 Flavonoid UFGT medium pass
Potra002084g16248.1 Flavonoid UFGT high pass
Potra002084g16248.2 Flavonoid UFGT high pass
Potra002238g17196.1 Flavonoid UFGT medium pass
Potra002248g17270.1 Flavonoid UFGT high pass
Potra002248g17271.1 Flavonoid UFGT medium pass
Potra002248g17271.2 Flavonoid UFGT medium pass
Potra002249g17279.1 Flavonoid UFGT medium pass
Potra002249g17279.2 Flavonoid UFGT high pass
Potra002326g17794.1 Flavonoid UFGT low borderline
Potra002326g17794.2 Flavonoid UFGT low borderline
Potra002335g17855.1 Flavonoid UFGT high pass
Potra002394g18210.1 Flavonoid UFGT medium pass
Potra002493g18834.1 Flavonoid UFGT high pass
Potra002542g19139.1 Flavonoid UFGT medium pass
Potra002542g19149.1 Flavonoid UFGT medium pass