PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Potra005386g25382.2 Flavonoid UFGT high pass
Potra005957g25527.1 Flavonoid UFGT medium pass
Potra006599g25730.1 Flavonoid UFGT medium pass
Potra006767g25783.1 Flavonoid UFGT medium pass
Potra008976g26268.1 Flavonoid UFGT high pass
Potra010120g26493.1 Flavonoid UFGT medium pass
Potra010120g26493.2 Flavonoid UFGT medium pass
Potra010264g26542.1 Flavonoid UFGT high pass
Potra010265g26544.1 Flavonoid UFGT low borderline
Potra149729g26653.1 Flavonoid UFGT medium pass
Potra149729g26654.1 Flavonoid UFGT medium pass
Potra152775g26714.1 Flavonoid UFGT high pass
Potra152775g26714.2 Flavonoid UFGT high pass
Potra156118g30923.1 Flavonoid UFGT medium pass
Potra156816g26795.1 Flavonoid UFGT medium pass
Potra160951g26895.1 Flavonoid UFGT high pass
Potra162313g27008.1 Flavonoid UFGT medium pass
Potra166950g27242.1 Flavonoid UFGT medium pass
Potra166950g27242.2 Flavonoid UFGT medium pass
Potra166995g27247.1 Flavonoid UFGT medium pass
Potra167387g27272.1 Flavonoid UFGT high pass
Potra169534g27450.1 Flavonoid UFGT high pass
Potra170761g27542.1 Flavonoid UFGT low borderline
Potra175062g27770.1 Flavonoid UFGT medium pass
Potra179017g31267.1 Flavonoid UFGT medium pass
Potra179441g28018.1 Flavonoid UFGT high pass
Potra180059g28071.1 Flavonoid UFGT medium pass
Potra183481g28309.1 Flavonoid UFGT medium pass
Potra183726g28328.1 Flavonoid UFGT medium pass
Potra188698g28628.1 Flavonoid UFGT high pass
Potra188893g28644.1 Flavonoid UFGT medium pass
Potra188893g28644.2 Flavonoid UFGT medium pass
Potra196048g29079.1 Flavonoid UFGT medium pass
Potra199775g29438.1 Flavonoid UFGT medium pass
Potra199855g29446.1 Flavonoid UFGT high pass
Potra200052g29464.1 Flavonoid UFGT high pass
Potra200116g29469.1 Flavonoid UFGT medium pass
Potra200201g29475.1 Flavonoid UFGT medium pass