PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000493g03142.3 Flavonoid F3H low borderline
Potra000526g03608.1 Flavonoid F3H medium borderline
Potra000526g03608.2 Flavonoid F3H medium borderline
Potra000526g03608.3 Flavonoid F3H medium borderline
Potra000526g03608.4 Flavonoid F3H medium borderline
Potra000526g03608.5 Flavonoid F3H medium borderline
Potra000568g04179.1 Flavonoid F3H medium borderline
Potra000571g04229.1 Flavonoid F3H medium borderline
Potra000571g04229.2 Flavonoid F3H medium borderline
Potra000571g04229.3 Flavonoid F3H medium borderline
Potra000571g04229.4 Flavonoid F3H medium borderline
Potra000583g04349.1 Flavonoid F3H medium borderline
Potra000583g04349.2 Flavonoid F3H medium pass
Potra000628g04791.1 Flavonoid F3H medium pass
Potra000628g04791.2 Flavonoid F3H medium pass
Potra000674g05224.1 Flavonoid F3H medium borderline
Potra000674g05224.2 Flavonoid F3H medium borderline
Potra000674g05224.3 Flavonoid F3H medium borderline
Potra000678g05256.1 Flavonoid F3H low borderline
Potra000818g06512.1 Flavonoid F3H medium borderline
Potra000818g06512.2 Flavonoid F3H medium borderline
Potra000818g06517.1 Flavonoid F3H medium borderline
Potra000923g07472.1 Flavonoid F3H medium borderline
Potra000923g07472.2 Flavonoid F3H medium borderline
Potra000925g07487.1 Flavonoid F3H medium borderline
Potra000925g07487.2 Flavonoid F3H medium borderline
Potra000925g07487.3 Flavonoid F3H medium borderline
Potra000925g07488.1 Flavonoid F3H medium borderline
Potra000925g07488.2 Flavonoid F3H medium borderline
Potra000925g07488.3 Flavonoid F3H medium borderline
Potra000928g07560.1 Flavonoid F3H medium borderline
Potra000928g07560.2 Flavonoid F3H medium borderline
Potra000959g07878.1 Flavonoid F3H medium borderline
Potra001064g09135.1 Flavonoid F3H medium borderline
Potra001064g09135.2 Flavonoid F3H medium borderline
Potra001064g09135.3 Flavonoid F3H medium borderline
Potra001064g09135.4 Flavonoid F3H medium borderline
Potra001094g09530.1 Flavonoid F3H medium borderline
Potra001094g09530.2 Flavonoid F3H medium borderline
Potra001094g09530.3 Flavonoid F3H medium borderline
Potra001105g09661.1 Flavonoid F3H low borderline
Potra001147g09990.1 Flavonoid F3H medium borderline
Potra001147g09990.2 Flavonoid F3H medium borderline
Potra001147g09990.3 Flavonoid F3H medium borderline
Potra001147g09990.4 Flavonoid F3H medium borderline
Potra001166g10111.1 Flavonoid F3H medium borderline
Potra001166g10111.2 Flavonoid F3H medium borderline
Potra001166g10111.3 Flavonoid F3H medium borderline
Potra001195g10332.1 Flavonoid F3H medium borderline
Potra001195g10332.2 Flavonoid F3H medium borderline