PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra002590g19480.1 Terpenoid BAHD medium pass
Potra002590g19480.2 Terpenoid BAHD medium pass
Potra002626g19603.1 Terpenoid BAHD low borderline
Potra002716g19821.1 Terpenoid BAHD medium pass
Potra002716g19821.2 Terpenoid BAHD medium pass
Potra002731g19862.1 Terpenoid BAHD medium pass
Potra002731g19862.2 Terpenoid BAHD medium pass
Potra002731g19862.3 Terpenoid BAHD medium pass
Potra002749g19899.1 Terpenoid BAHD medium pass
Potra002749g19899.2 Terpenoid BAHD medium pass
Potra002749g19899.3 Terpenoid BAHD medium pass
Potra002765g19934.1 Terpenoid BAHD medium pass
Potra002765g19934.2 Terpenoid BAHD medium pass
Potra002765g19934.3 Terpenoid BAHD medium pass
Potra002817g20035.1 Terpenoid BAHD medium pass
Potra002817g20036.1 Terpenoid BAHD medium pass
Potra002821g20059.1 Terpenoid BAHD medium pass
Potra002821g20059.2 Terpenoid BAHD medium pass
Potra002821g20059.3 Terpenoid BAHD medium pass
Potra002947g20369.1 Terpenoid BAHD medium pass
Potra002947g20369.2 Terpenoid BAHD medium pass
Potra002947g20369.3 Terpenoid BAHD medium pass
Potra002947g20369.4 Terpenoid BAHD medium pass
Potra002988g20467.1 Terpenoid BAHD medium pass
Potra002995g20494.1 Terpenoid BAHD medium pass
Potra003028g20564.1 Terpenoid BAHD medium pass
Potra003028g20565.1 Terpenoid BAHD medium pass
Potra003028g20565.2 Terpenoid BAHD low borderline
Potra003028g20565.3 Terpenoid BAHD low borderline
Potra003032g20573.1 Terpenoid BAHD low borderline
Potra003032g20573.2 Terpenoid BAHD low borderline
Potra003032g20573.3 Terpenoid BAHD low borderline
Potra003032g20573.4 Terpenoid BAHD low borderline
Potra003032g20573.5 Terpenoid BAHD low borderline
Potra003032g20573.6 Terpenoid BAHD low borderline
Potra003085g20704.1 Terpenoid BAHD low borderline
Potra003146g20849.1 Terpenoid BAHD medium pass
Potra003146g20849.2 Terpenoid BAHD medium pass
Potra003179g20911.1 Terpenoid BAHD low borderline
Potra003179g20911.2 Terpenoid BAHD low borderline
Potra003179g20911.3 Terpenoid BAHD low borderline
Potra003213g21015.1 Terpenoid BAHD medium pass
Potra003220g21051.1 Terpenoid BAHD medium pass
Potra003220g21051.2 Terpenoid BAHD medium pass
Potra003362g32159.1 Terpenoid BAHD medium pass
Potra003392g21536.1 Terpenoid BAHD medium pass
Potra003392g21536.2 Terpenoid BAHD medium pass
Potra003392g21536.3 Terpenoid BAHD medium pass
Potra003392g21536.4 Terpenoid BAHD medium pass
Potra003409g21580.1 Terpenoid BAHD medium pass