PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra198261g29299.1 Terpenoid BAHD low borderline
Potra198463g29320.1 Terpenoid BAHD medium pass
Potra198690g29344.1 Terpenoid BAHD medium pass
Potra199778g29439.1 Terpenoid BAHD medium pass
Potra000489g03064.1 Terpenoid CMK/IspE high pass
Potra000489g03064.2 Terpenoid CMK/IspE high pass
Potra000489g03064.3 Terpenoid CMK/IspE medium pass
Potra001707g13906.1 Terpenoid CMK/IspE low borderline
Potra001707g13906.2 Terpenoid CMK/IspE low borderline
Potra001740g14181.1 Terpenoid CMK/IspE low borderline
Potra001740g14181.2 Terpenoid CMK/IspE low borderline
Potra001740g14181.3 Terpenoid CMK/IspE low borderline
Potra001856g14866.1 Terpenoid CMK/IspE high pass
Potra001856g14866.2 Terpenoid CMK/IspE high pass
Potra001856g14866.3 Terpenoid CMK/IspE high pass
Potra001856g14866.4 Terpenoid CMK/IspE high pass
Potra001856g14866.5 Terpenoid CMK/IspE high pass
Potra000180g00713.1 Terpenoid CYP71 medium pass
Potra000346g01222.1 Terpenoid CYP71 medium pass
Potra000346g01222.2 Terpenoid CYP71 medium pass
Potra000353g01348.1 Terpenoid CYP71 medium pass
Potra000353g01348.2 Terpenoid CYP71 medium pass
Potra000353g01348.3 Terpenoid CYP71 medium pass
Potra000358g01428.1 Terpenoid CYP71 medium pass
Potra000358g01428.2 Terpenoid CYP71 medium pass
Potra000358g01428.3 Terpenoid CYP71 medium pass
Potra000370g01540.1 Terpenoid CYP71 medium borderline
Potra000379g01666.1 Terpenoid CYP71 medium pass
Potra000413g02054.1 Terpenoid CYP71 medium pass
Potra000413g02054.2 Terpenoid CYP71 medium pass
Potra000413g02054.3 Terpenoid CYP71 medium pass
Potra000413g02054.4 Terpenoid CYP71 medium pass
Potra000413g02054.5 Terpenoid CYP71 medium pass
Potra000498g03191.1 Terpenoid CYP71 low borderline
Potra000498g03191.2 Terpenoid CYP71 low borderline
Potra000544g03843.1 Terpenoid CYP71 low borderline
Potra000544g03843.2 Terpenoid CYP71 low borderline
Potra000544g03843.3 Terpenoid CYP71 low borderline
Potra000544g03843.4 Terpenoid CYP71 low borderline
Potra000544g03843.5 Terpenoid CYP71 low borderline
Potra000593g04498.1 Terpenoid CYP71 medium pass
Potra000631g04822.1 Terpenoid CYP71 low borderline
Potra000631g04822.2 Terpenoid CYP71 low borderline
Potra000631g04822.3 Terpenoid CYP71 low borderline
Potra000631g04822.4 Terpenoid CYP71 low borderline
Potra000727g05689.1 Terpenoid CYP71 medium pass
Potra000727g05689.2 Terpenoid CYP71 medium pass
Potra000849g34183.1 Terpenoid CYP71 medium borderline
Potra000887g07165.1 Terpenoid CYP71 medium pass
Potra000887g07165.2 Terpenoid CYP71 medium pass