PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000799g06337.2 Alkaloid GES medium pass
Potra000799g06337.3 Alkaloid GES medium pass
Potra000907g07356.1 Alkaloid GES medium pass
Potra000907g07356.2 Alkaloid GES medium pass
Potra000907g07356.3 Alkaloid GES medium pass
Potra000907g07356.4 Alkaloid GES medium pass
Potra000907g07356.5 Alkaloid GES low borderline
Potra000936g07649.1 Alkaloid GES medium pass
Potra001007g08379.1 Alkaloid GES medium pass
Potra001007g08379.2 Alkaloid GES medium pass
Potra001007g08379.3 Alkaloid GES medium pass
Potra001007g08379.4 Alkaloid GES medium pass
Potra001105g09664.1 Alkaloid GES low borderline
Potra001105g09664.2 Alkaloid GES low borderline
Potra001105g09664.3 Alkaloid GES low borderline
Potra001137g09957.1 Alkaloid GES medium pass
Potra001137g09957.2 Alkaloid GES medium pass
Potra002510g18944.1 Alkaloid GES low borderline
Potra002510g18944.2 Alkaloid GES medium pass
Potra002510g18944.3 Alkaloid GES medium pass
Potra003363g21454.1 Alkaloid GES medium pass
Potra003363g21454.2 Alkaloid GES medium pass
Potra003593g22106.1 Alkaloid GES medium pass
Potra003593g22106.2 Alkaloid GES medium pass
Potra003593g22106.3 Alkaloid GES medium pass
Potra003593g22106.4 Alkaloid GES medium pass
Potra003593g22106.5 Alkaloid GES medium pass
Potra004008g24156.1 Alkaloid GES medium pass
Potra004008g24156.2 Alkaloid GES medium pass
Potra004008g24156.3 Alkaloid GES medium pass
Potra004008g24156.4 Alkaloid GES medium pass
Potra004008g24156.5 Alkaloid GES medium pass
Potra004263g24752.1 Alkaloid GES medium pass
Potra004263g24752.2 Alkaloid GES medium pass
Potra004263g24752.3 Alkaloid GES medium pass
Potra004983g25241.1 Alkaloid GES medium pass
Potra004983g25241.2 Alkaloid GES medium pass
Potra005047g25257.1 Alkaloid GES medium pass
Potra005047g25257.2 Alkaloid GES medium pass
Potra006816g25817.1 Alkaloid GES medium pass
Potra009261g26315.1 Alkaloid GES medium pass
Potra009264g26317.1 Alkaloid GES medium pass
Potra009264g26317.2 Alkaloid GES medium pass
Potra009264g26317.3 Alkaloid GES medium pass
Potra009264g26317.4 Alkaloid GES medium pass
Potra009264g26317.5 Alkaloid GES medium pass
Potra121378g26601.1 Alkaloid GES medium pass
Potra172024g27582.1 Alkaloid GES medium pass
Potra180572g28113.1 Alkaloid GES medium pass
Potra180572g28113.2 Alkaloid GES medium pass