PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra001300g11183.1 Phenylpropanoid CCR medium pass
Potra001300g11183.2 Phenylpropanoid CCR medium pass
Potra001566g12947.1 Phenylpropanoid CCR low borderline
Potra001566g12947.2 Phenylpropanoid CCR low borderline
Potra001566g12947.3 Phenylpropanoid CCR low borderline
Potra001586g13131.1 Phenylpropanoid CCR medium borderline
Potra001586g13131.2 Phenylpropanoid CCR medium borderline
Potra001586g13131.3 Phenylpropanoid CCR medium borderline
Potra001791g14538.1 Phenylpropanoid CCR medium borderline
Potra001823g14702.2 Phenylpropanoid CCR medium borderline
Potra001917g15214.1 Phenylpropanoid CCR medium pass
Potra001917g15223.1 Phenylpropanoid CCR medium borderline
Potra001917g15223.2 Phenylpropanoid CCR medium borderline
Potra001917g15224.1 Phenylpropanoid CCR medium borderline
Potra001917g15224.2 Phenylpropanoid CCR medium borderline
Potra002016g15815.1 Phenylpropanoid CCR medium borderline
Potra002573g19364.1 Phenylpropanoid CCR low borderline
Potra002573g19364.2 Phenylpropanoid CCR low borderline
Potra002573g19364.3 Phenylpropanoid CCR low borderline
Potra002573g19364.4 Phenylpropanoid CCR low borderline
Potra002573g19364.5 Phenylpropanoid CCR low borderline
Potra002573g19364.6 Phenylpropanoid CCR low borderline
Potra002591g19481.1 Phenylpropanoid CCR medium borderline
Potra002591g19481.2 Phenylpropanoid CCR medium borderline
Potra003721g35625.1 Phenylpropanoid CCR medium borderline
Potra006461g25689.1 Phenylpropanoid CCR medium borderline
Potra167557g27286.1 Phenylpropanoid CCR low borderline
Potra167557g27286.2 Phenylpropanoid CCR low borderline
Potra167557g27286.3 Phenylpropanoid CCR medium pass
Potra170357g27510.1 Phenylpropanoid CCR medium pass
Potra182534g28233.1 Phenylpropanoid CCR medium borderline
Potra194092g28921.4 Phenylpropanoid CCR medium borderline
Potra000016g00090.1 Phenylpropanoid CCoAOMT medium pass
Potra000016g00090.2 Phenylpropanoid CCoAOMT medium pass
Potra000565g35777.1 Phenylpropanoid CCoAOMT medium pass
Potra000668g05175.1 Phenylpropanoid CCoAOMT medium pass
Potra001581g13072.1 Phenylpropanoid CCoAOMT medium pass
Potra002078g16198.1 Phenylpropanoid CCoAOMT medium pass
Potra002078g16198.2 Phenylpropanoid CCoAOMT medium pass
Potra002078g16198.3 Phenylpropanoid CCoAOMT medium pass
Potra002078g16198.4 Phenylpropanoid CCoAOMT medium pass
Potra000378g01639.1 Phenylpropanoid COMT medium pass
Potra000544g03844.1 Phenylpropanoid COMT low borderline
Potra000571g04228.1 Phenylpropanoid COMT medium pass
Potra000571g04228.2 Phenylpropanoid COMT medium pass
Potra000571g04228.3 Phenylpropanoid COMT medium pass
Potra000571g04228.4 Phenylpropanoid COMT medium pass
Potra000828g06610.1 Phenylpropanoid COMT low borderline
Potra000847g06837.1 Phenylpropanoid COMT medium pass
Potra000847g06837.2 Phenylpropanoid COMT medium pass