PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra005780g34530.1 Steroid SMT1/SMT2/SMT3 medium pass
Potra153148g34436.1 Steroid SMT1/SMT2/SMT3 medium pass
Potra173715g27666.1 Steroid SMT1/SMT2/SMT3 medium pass
Potra180304g28087.1 Steroid SMT1/SMT2/SMT3 medium pass
Potra189222g28668.1 Steroid SMT1/SMT2/SMT3 medium pass
Potra196066g29080.1 Steroid SMT1/SMT2/SMT3 low borderline
Potra196066g29080.2 Steroid SMT1/SMT2/SMT3 medium pass
Potra196066g29081.1 Steroid SMT1/SMT2/SMT3 low borderline
Potra196383g29099.1 Steroid SMT1/SMT2/SMT3 low borderline
Potra196383g29099.2 Steroid SMT1/SMT2/SMT3 low borderline
Potra196383g29099.3 Steroid SMT1/SMT2/SMT3 low borderline
Potra196383g29099.4 Steroid SMT1/SMT2/SMT3 low borderline
Potra000689g05354.1 Steroid SQE medium pass
Potra000874g07027.2 Steroid SQE low borderline
Potra000874g07027.3 Steroid SQE low borderline
Potra001124g09914.1 Steroid SQE low borderline
Potra001124g09914.2 Steroid SQE low borderline
Potra001169g10127.1 Steroid SQE low borderline
Potra001308g11238.1 Steroid SQE medium pass
Potra001308g11238.2 Steroid SQE medium pass
Potra001308g11238.3 Steroid SQE medium pass
Potra001888g15033.1 Steroid SQE medium pass
Potra001888g15033.2 Steroid SQE medium pass
Potra001888g15033.3 Steroid SQE medium pass
Potra001888g15033.4 Steroid SQE medium pass
Potra002193g16904.1 Steroid SQE medium pass
Potra002193g16904.2 Steroid SQE medium pass
Potra002193g16904.3 Steroid SQE medium pass
Potra002193g16904.4 Steroid SQE medium pass
Potra003997g24062.1 Steroid SQE medium pass
Potra003997g24062.2 Steroid SQE medium pass
Potra003997g24062.3 Steroid SQE medium pass
Potra003997g24062.4 Steroid SQE medium pass
Potra187783g28534.1 Steroid SQE medium pass
Potra187783g28534.2 Steroid SQE medium pass
Potra000487g03021.1 Steroid SQS/FDFT1 low borderline
Potra000487g03021.2 Steroid SQS/FDFT1 low borderline
Potra000487g03022.1 Steroid SQS/FDFT1 low borderline
Potra001057g09054.1 Steroid SQS/FDFT1 medium pass
Potra001057g09054.2 Steroid SQS/FDFT1 medium pass
Potra001057g09054.3 Steroid SQS/FDFT1 medium pass
Potra001057g09054.4 Steroid SQS/FDFT1 medium pass
Potra001181g10241.1 Steroid SQS/FDFT1 medium pass
Potra001181g10241.2 Steroid SQS/FDFT1 medium pass
Potra001181g10241.3 Steroid SQS/FDFT1 medium pass
Potra001344g11542.1 Steroid SQS/FDFT1 low borderline
Potra001402g11907.1 Steroid SQS/FDFT1 high pass
Potra001402g11907.2 Steroid SQS/FDFT1 high pass
Potra001402g11907.3 Steroid SQS/FDFT1 high pass
Potra001402g11907.4 Steroid SQS/FDFT1 high pass