PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra005488g25412.3 Flavonoid IFR low borderline
Potra005622g25446.1 Flavonoid IFR high pass
Potra005622g25446.2 Flavonoid IFR high pass
Potra005622g25446.3 Flavonoid IFR high pass
Potra005622g25446.4 Flavonoid IFR high pass
Potra006738g25766.1 Flavonoid IFR high pass
Potra006738g25766.2 Flavonoid IFR medium pass
Potra006738g25766.3 Flavonoid IFR high pass
Potra137783g34391.1 Flavonoid IFR medium pass
Potra161143g26908.1 Flavonoid IFR low borderline
Potra161143g26908.2 Flavonoid IFR low borderline
Potra161143g26908.3 Flavonoid IFR low borderline
Potra190055g28742.1 Flavonoid IFR high pass
Potra190055g28742.2 Flavonoid IFR high pass
Potra190055g28742.3 Flavonoid IFR high pass
Potra000138g00478.1 Flavonoid IFS low borderline
Potra000148g00519.1 Flavonoid IFS medium borderline
Potra000158g00569.1 Flavonoid IFS medium borderline
Potra000175g00665.1 Flavonoid IFS low borderline
Potra000180g00706.1 Flavonoid IFS low borderline
Potra000180g00706.2 Flavonoid IFS low borderline
Potra000180g00706.3 Flavonoid IFS low borderline
Potra000180g00706.4 Flavonoid IFS low borderline
Potra000341g01173.1 Flavonoid IFS low borderline
Potra000341g01173.2 Flavonoid IFS low borderline
Potra000341g01173.3 Flavonoid IFS low borderline
Potra000344g01217.1 Flavonoid IFS low borderline
Potra000344g01217.2 Flavonoid IFS low borderline
Potra000370g01539.1 Flavonoid IFS low borderline
Potra000387g01755.1 Flavonoid IFS low borderline
Potra000432g02300.2 Flavonoid IFS low borderline
Potra000432g02302.1 Flavonoid IFS low borderline
Potra000458g02654.1 Flavonoid IFS low borderline
Potra000508g03331.1 Flavonoid IFS low borderline
Potra000508g03331.2 Flavonoid IFS low borderline
Potra000542g03822.1 Flavonoid IFS low borderline
Potra000542g03822.2 Flavonoid IFS low borderline
Potra000542g03822.5 Flavonoid IFS low borderline
Potra000601g04563.1 Flavonoid IFS low borderline
Potra000601g04563.2 Flavonoid IFS low borderline
Potra000633g04834.3 Flavonoid IFS low borderline
Potra000655g05045.1 Flavonoid IFS medium borderline
Potra000663g05121.1 Flavonoid IFS low borderline
Potra000683g05292.1 Flavonoid IFS low borderline
Potra000685g05310.1 Flavonoid IFS medium borderline
Potra000701g05464.1 Flavonoid IFS low borderline
Potra000701g05464.2 Flavonoid IFS low borderline
Potra000701g05464.3 Flavonoid IFS low borderline
Potra000701g05464.4 Flavonoid IFS low borderline
Potra000701g05464.5 Flavonoid IFS low borderline