PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Potra002642g19640.2 Alkaloid IO medium borderline
Potra002699g19788.4 Alkaloid IO low borderline
Potra003044g20609.1 Alkaloid IO low borderline
Potra003542g21960.1 Alkaloid IO medium borderline
Potra004401g24886.4 Alkaloid IO low borderline
Potra005066g25262.1 Alkaloid IO medium borderline
Potra005630g25450.1 Alkaloid IO medium borderline
Potra006311g25650.1 Alkaloid IO medium borderline
Potra006786g25798.1 Alkaloid IO medium borderline
Potra009323g26336.3 Alkaloid IO low borderline
Potra009968g26457.1 Alkaloid IO medium borderline
Potra009968g26457.2 Alkaloid IO medium borderline
Potra010131g26496.1 Alkaloid IO low borderline
Potra160898g26890.1 Alkaloid IO medium borderline
Potra167018g27249.1 Alkaloid IO low borderline
Potra168027g27333.2 Alkaloid IO low borderline
Potra199887g29453.1 Alkaloid IO medium pass
Potra200149g29472.2 Alkaloid IO low borderline
Potra000546g03888.1 Alkaloid ISY medium pass
Potra000729g05728.1 Alkaloid ISY medium pass
Potra000729g05729.1 Alkaloid ISY medium pass
Potra000729g05730.1 Alkaloid ISY medium pass
Potra000729g05731.1 Alkaloid ISY high pass
Potra000729g33252.1 Alkaloid ISY medium pass
Potra000740g05842.1 Alkaloid ISY low borderline
Potra002253g17310.1 Alkaloid ISY low borderline
Potra002454g18594.1 Alkaloid ISY medium pass
Potra003354g21429.1 Alkaloid ISY medium pass
Potra003354g21429.2 Alkaloid ISY medium pass
Potra179495g28020.1 Alkaloid ISY high pass
Potra179495g28020.2 Alkaloid ISY high pass
Potra191357g34264.1 Alkaloid ISY medium pass
Potra000244g00966.1 Alkaloid LAMT medium borderline
Potra000244g00966.2 Alkaloid LAMT medium borderline
Potra000244g00966.3 Alkaloid LAMT medium borderline
Potra000296g01079.1 Alkaloid LAMT medium borderline
Potra000525g03578.1 Alkaloid LAMT medium borderline
Potra000525g03578.2 Alkaloid LAMT medium borderline
Potra000525g03578.3 Alkaloid LAMT medium borderline
Potra000623g04734.1 Alkaloid LAMT medium borderline
Potra001027g08595.1 Alkaloid LAMT medium borderline
Potra001055g09035.1 Alkaloid LAMT medium borderline
Potra001055g09035.2 Alkaloid LAMT medium borderline
Potra001519g12644.1 Alkaloid LAMT medium borderline
Potra001519g12644.2 Alkaloid LAMT medium borderline
Potra001519g12651.1 Alkaloid LAMT medium borderline
Potra001519g12651.2 Alkaloid LAMT medium borderline
Potra001519g12651.3 Alkaloid LAMT medium borderline
Potra001519g12651.4 Alkaloid LAMT medium borderline
Potra001674g13732.1 Alkaloid LAMT medium borderline