PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Potra004006g24138.1 Alkaloid LAMT medium borderline
Potra004006g24138.2 Alkaloid LAMT medium borderline
Potra004006g24138.3 Alkaloid LAMT medium pass
Potra004254g24739.1 Alkaloid LAMT medium borderline
Potra004254g24739.2 Alkaloid LAMT medium borderline
Potra004254g24739.3 Alkaloid LAMT medium borderline
Potra008980g34303.1 Alkaloid LAMT medium borderline
Potra164833g27188.1 Alkaloid LAMT medium borderline
Potra164833g27188.2 Alkaloid LAMT medium borderline
Potra170776g27546.1 Alkaloid LAMT medium borderline
Potra181730g28177.1 Alkaloid LAMT low borderline
Potra000766g06055.1 Alkaloid MPO medium pass
Potra001320g11326.1 Alkaloid MPO high pass
Potra001320g11326.2 Alkaloid MPO medium pass
Potra001338g11476.1 Alkaloid MPO medium pass
Potra001338g11476.2 Alkaloid MPO medium pass
Potra001338g11476.3 Alkaloid MPO medium pass
Potra001338g11476.4 Alkaloid MPO medium pass
Potra001338g11476.5 Alkaloid MPO high pass
Potra002533g19092.1 Alkaloid MPO medium pass
Potra002533g19092.2 Alkaloid MPO medium pass
Potra004030g24346.1 Alkaloid MPO medium pass
Potra004030g24346.2 Alkaloid MPO medium pass
Potra004030g24348.1 Alkaloid MPO medium pass
Potra004355g24844.1 Alkaloid MPO medium pass
Potra004355g24845.1 Alkaloid MPO medium pass
Potra004355g24845.2 Alkaloid MPO medium pass
Potra005786g25486.1 Alkaloid MPO medium pass
Potra000002g00005.1 Alkaloid NCS medium borderline
Potra000002g00005.2 Alkaloid NCS medium borderline
Potra000002g00005.3 Alkaloid NCS medium borderline
Potra000002g00005.4 Alkaloid NCS medium borderline
Potra000002g00005.5 Alkaloid NCS medium borderline
Potra000055g00223.1 Alkaloid NCS low borderline
Potra000055g00223.2 Alkaloid NCS low borderline
Potra000440g02424.1 Alkaloid NCS medium borderline
Potra000526g03608.3 Alkaloid NCS medium borderline
Potra000674g05224.2 Alkaloid NCS medium borderline
Potra000811g06457.1 Alkaloid NCS medium borderline
Potra000932g07617.1 Alkaloid NCS medium borderline
Potra000932g07617.2 Alkaloid NCS medium borderline
Potra001132g09938.1 Alkaloid NCS low borderline
Potra001205g10418.1 Alkaloid NCS medium borderline
Potra001205g10418.2 Alkaloid NCS medium borderline
Potra001657g13605.1 Alkaloid NCS low borderline
Potra001677g13741.1 Alkaloid NCS medium borderline
Potra001898g15081.1 Alkaloid NCS medium borderline
Potra001898g15081.2 Alkaloid NCS medium borderline
Potra001898g15081.3 Alkaloid NCS medium borderline
Potra001898g15081.4 Alkaloid NCS medium borderline