PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Potra002749g19898.3 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002799g19999.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra002799g19999.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra002844g20113.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002844g20113.2 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002844g20113.3 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.2 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.3 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.4 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Potra002950g20378.5 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002950g20378.6 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra002950g20378.7 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra003460g21739.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.3 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.4 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003460g21739.5 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003577g22068.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003577g22068.2 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003577g22068.3 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003577g22068.4 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra003765g22752.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra003765g22753.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra003789g22867.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra003789g22867.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra003967g23820.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003967g23820.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003967g23820.3 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003967g23820.4 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra003994g24044.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra004602g25106.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra004602g25106.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Potra006306g25646.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Potra188950g28648.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Potra189935g28732.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Potra198448g29318.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Potra000611g04646.1 Phenylpropanoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra007760g26019.1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Potra008798g26230.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra008798g26230.2 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra010140g26499.2 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra174349g27713.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Potra189403g28680.1 Phenylpropanoid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Potra000029g00144.1 Phenylpropanoid POD low borderline POD__00012__sp_Q10N21_APX1_ORYSJ
Potra000029g00144.2 Phenylpropanoid POD low borderline POD__00012__sp_Q10N21_APX1_ORYSJ
Potra000076g00272.1 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Potra000076g00273.1 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
Potra000076g00273.2 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE