PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000857g06938.2 Flavonoid UFGT high pass
Potra000887g07160.1 Flavonoid UFGT low borderline
Potra000887g07161.1 Flavonoid UFGT high pass
Potra000948g07769.1 Flavonoid UFGT low borderline
Potra000948g33551.1 Flavonoid UFGT low borderline
Potra000963g07916.1 Flavonoid UFGT low borderline
Potra000963g07916.2 Flavonoid UFGT low borderline
Potra000963g07916.3 Flavonoid UFGT low borderline
Potra000963g07916.4 Flavonoid UFGT low borderline
Potra000975g08081.1 Flavonoid UFGT high pass
Potra001008g08387.1 Flavonoid UFGT high pass
Potra001020g08514.1 Flavonoid UFGT high pass
Potra001020g08523.1 Flavonoid UFGT medium pass
Potra001020g08523.2 Flavonoid UFGT medium pass
Potra001020g08524.1 Flavonoid UFGT medium pass
Potra001020g08525.1 Flavonoid UFGT high pass
Potra001053g08999.1 Flavonoid UFGT medium pass
Potra001110g09740.1 Flavonoid UFGT low borderline
Potra001116g09823.1 Flavonoid UFGT medium pass
Potra001117g09832.1 Flavonoid UFGT medium pass
Potra001117g09832.2 Flavonoid UFGT medium pass
Potra001117g09848.1 Flavonoid UFGT medium pass
Potra001117g09848.2 Flavonoid UFGT medium pass
Potra001145g09981.1 Flavonoid UFGT medium pass
Potra001264g10915.1 Flavonoid UFGT high pass
Potra001264g10917.1 Flavonoid UFGT high pass
Potra001264g10918.1 Flavonoid UFGT medium pass
Potra001381g11785.1 Flavonoid UFGT high pass
Potra001441g12116.1 Flavonoid UFGT medium pass
Potra001441g12116.2 Flavonoid UFGT medium pass
Potra001441g12117.1 Flavonoid UFGT low borderline
Potra001509g12588.1 Flavonoid UFGT medium pass
Potra001509g12588.2 Flavonoid UFGT medium pass
Potra001607g13242.1 Flavonoid UFGT medium pass
Potra001607g13247.1 Flavonoid UFGT medium pass
Potra001607g13247.2 Flavonoid UFGT medium pass
Potra001627g13389.1 Flavonoid UFGT medium pass
Potra001659g13622.1 Flavonoid UFGT medium pass
Potra001659g13622.2 Flavonoid UFGT medium pass
Potra001659g13623.1 Flavonoid UFGT high pass
Potra001720g13996.1 Flavonoid UFGT high pass
Potra001774g14451.1 Flavonoid UFGT medium pass
Potra001781g14493.1 Flavonoid UFGT high pass
Potra001781g14495.1 Flavonoid UFGT medium pass
Potra001781g14495.2 Flavonoid UFGT high pass
Potra001781g14495.3 Flavonoid UFGT high pass
Potra001781g14495.4 Flavonoid UFGT high pass
Potra001908g15140.1 Flavonoid UFGT high pass
Potra001908g15140.2 Flavonoid UFGT high pass
Potra002035g15908.1 Flavonoid UFGT high pass