PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Potra003351g21423.6 Rosmarinic Acid 4CL low borderline
Potra003351g21423.7 Rosmarinic Acid 4CL low borderline
Potra003626g22207.1 Rosmarinic Acid 4CL medium pass
Potra003626g22207.2 Rosmarinic Acid 4CL medium pass
Potra003626g22207.3 Rosmarinic Acid 4CL medium pass
Potra003648g22290.1 Rosmarinic Acid 4CL low borderline
Potra003648g22290.2 Rosmarinic Acid 4CL low borderline
Potra003648g22290.3 Rosmarinic Acid 4CL low borderline
Potra003648g22290.4 Rosmarinic Acid 4CL low borderline
Potra003648g22290.5 Rosmarinic Acid 4CL low borderline
Potra003823g22994.4 Rosmarinic Acid 4CL low borderline
Potra003823g22994.5 Rosmarinic Acid 4CL low borderline
Potra003823g22994.6 Rosmarinic Acid 4CL low borderline
Potra004099g34518.1 Rosmarinic Acid 4CL medium pass
Potra004222g24700.1 Rosmarinic Acid 4CL medium pass
Potra004222g24700.2 Rosmarinic Acid 4CL medium pass
Potra004222g24700.3 Rosmarinic Acid 4CL medium pass
Potra004222g24700.4 Rosmarinic Acid 4CL medium pass
Potra007461g25972.1 Rosmarinic Acid 4CL medium pass
Potra007461g25972.2 Rosmarinic Acid 4CL medium pass
Potra007461g25972.3 Rosmarinic Acid 4CL medium pass
Potra169071g27405.1 Rosmarinic Acid 4CL medium pass
Potra169071g27405.2 Rosmarinic Acid 4CL medium pass
Potra169071g27405.3 Rosmarinic Acid 4CL medium pass
Potra169580g34519.1 Rosmarinic Acid 4CL medium pass
Potra177143g27937.1 Rosmarinic Acid 4CL medium pass
Potra177143g27937.2 Rosmarinic Acid 4CL medium pass
Potra177143g27937.3 Rosmarinic Acid 4CL medium pass
Potra179682g28040.1 Rosmarinic Acid 4CL medium pass
Potra179682g28040.2 Rosmarinic Acid 4CL medium pass
Potra179682g28040.3 Rosmarinic Acid 4CL medium pass
Potra194176g28935.1 Rosmarinic Acid 4CL medium pass
Potra000028g00138.1 Rosmarinic Acid C4H medium pass
Potra000129g00422.1 Rosmarinic Acid C4H low borderline
Potra000138g00478.1 Rosmarinic Acid C4H low borderline
Potra000148g00519.1 Rosmarinic Acid C4H low borderline
Potra000158g00569.1 Rosmarinic Acid C4H low borderline
Potra000175g00665.1 Rosmarinic Acid C4H low borderline
Potra000180g00706.1 Rosmarinic Acid C4H low borderline
Potra000180g00706.2 Rosmarinic Acid C4H low borderline
Potra000341g01173.1 Rosmarinic Acid C4H low borderline
Potra000341g01173.2 Rosmarinic Acid C4H low borderline
Potra000341g01173.3 Rosmarinic Acid C4H low borderline
Potra000352g01310.1 Rosmarinic Acid C4H low borderline
Potra000357g01397.1 Rosmarinic Acid C4H low borderline
Potra000370g01539.1 Rosmarinic Acid C4H low borderline
Potra000370g01540.1 Rosmarinic Acid C4H low borderline
Potra000432g02300.1 Rosmarinic Acid C4H low borderline
Potra000432g02301.1 Rosmarinic Acid C4H low borderline
Potra000467g02785.1 Rosmarinic Acid C4H low borderline