PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra000353g01340.4 Alkaloid TDC low borderline
Potra000353g01340.5 Alkaloid TDC low borderline
Potra000353g01340.7 Alkaloid TDC low borderline
Potra000353g01340.8 Alkaloid TDC low borderline
Potra000353g01340.9 Alkaloid TDC low borderline
Potra001097g09561.4 Alkaloid TDC medium borderline
Potra001691g13833.1 Alkaloid TDC low borderline
Potra001691g13833.2 Alkaloid TDC low borderline
Potra002027g15871.1 Alkaloid TDC medium borderline
Potra002041g15947.1 Alkaloid TDC low borderline
Potra002041g15947.2 Alkaloid TDC low borderline
Potra002041g15947.3 Alkaloid TDC low borderline
Potra000073g00267.1 Alkaloid TRI/TRII medium pass
Potra000116g00380.1 Alkaloid TRI/TRII medium pass
Potra000435g02357.1 Alkaloid TRI/TRII medium pass
Potra000464g02753.1 Alkaloid TRI/TRII low borderline
Potra000526g03615.1 Alkaloid TRI/TRII medium pass
Potra000539g03793.1 Alkaloid TRI/TRII medium pass
Potra000539g03793.2 Alkaloid TRI/TRII medium pass
Potra000539g03793.3 Alkaloid TRI/TRII medium pass
Potra000649g04989.1 Alkaloid TRI/TRII low borderline
Potra000649g04989.2 Alkaloid TRI/TRII low borderline
Potra000649g04989.3 Alkaloid TRI/TRII low borderline
Potra000649g04989.4 Alkaloid TRI/TRII low borderline
Potra000649g04989.5 Alkaloid TRI/TRII low borderline
Potra000649g04989.6 Alkaloid TRI/TRII low borderline
Potra000727g05702.1 Alkaloid TRI/TRII medium pass
Potra000727g05702.2 Alkaloid TRI/TRII medium pass
Potra000727g05702.3 Alkaloid TRI/TRII medium pass
Potra000786g06234.1 Alkaloid TRI/TRII medium pass
Potra000786g06234.2 Alkaloid TRI/TRII medium pass
Potra000786g06234.3 Alkaloid TRI/TRII medium pass
Potra000786g06234.4 Alkaloid TRI/TRII medium pass
Potra000786g06234.5 Alkaloid TRI/TRII medium pass
Potra000786g06235.1 Alkaloid TRI/TRII medium pass
Potra000843g06799.1 Alkaloid TRI/TRII low borderline
Potra000843g06799.10 Alkaloid TRI/TRII low borderline
Potra000843g06799.11 Alkaloid TRI/TRII low borderline
Potra000843g06799.12 Alkaloid TRI/TRII low borderline
Potra000843g06799.2 Alkaloid TRI/TRII low borderline
Potra000843g06799.3 Alkaloid TRI/TRII low borderline
Potra000843g06799.4 Alkaloid TRI/TRII low borderline
Potra000843g06799.5 Alkaloid TRI/TRII low borderline
Potra000843g06799.6 Alkaloid TRI/TRII low borderline
Potra000843g06799.7 Alkaloid TRI/TRII low borderline
Potra000843g06799.8 Alkaloid TRI/TRII low borderline
Potra000843g06799.9 Alkaloid TRI/TRII low borderline
Potra000849g06858.1 Alkaloid TRI/TRII medium pass
Potra000850g33423.1 Alkaloid TRI/TRII medium pass
Potra000910g07376.1 Alkaloid TRI/TRII medium pass