PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

4329
Candidate Protein Records
3319
Pathway-Level Records
7441
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Potra002550g19206.1 Alkaloid TRI/TRII medium pass
Potra002550g19207.1 Alkaloid TRI/TRII medium pass
Potra002603g19542.1 Alkaloid TRI/TRII medium pass
Potra002603g19542.2 Alkaloid TRI/TRII medium pass
Potra002858g20159.1 Alkaloid TRI/TRII low borderline
Potra003218g21039.1 Alkaloid TRI/TRII medium pass
Potra003601g22132.1 Alkaloid TRI/TRII medium pass
Potra003601g22132.2 Alkaloid TRI/TRII medium pass
Potra003601g22132.3 Alkaloid TRI/TRII medium pass
Potra003601g22132.4 Alkaloid TRI/TRII medium pass
Potra003601g22132.5 Alkaloid TRI/TRII low borderline
Potra003706g22501.1 Alkaloid TRI/TRII medium pass
Potra003706g22501.2 Alkaloid TRI/TRII medium pass
Potra003706g22501.3 Alkaloid TRI/TRII medium pass
Potra003929g23581.1 Alkaloid TRI/TRII medium pass
Potra003929g23581.2 Alkaloid TRI/TRII medium pass
Potra003929g23581.3 Alkaloid TRI/TRII medium pass
Potra007827g35692.1 Alkaloid TRI/TRII medium pass
Potra009761g26425.1 Alkaloid TRI/TRII medium pass
Potra159952g30962.1 Alkaloid TRI/TRII medium pass
Potra161710g26956.1 Alkaloid TRI/TRII medium pass
Potra161710g26956.2 Alkaloid TRI/TRII medium pass
Potra161710g26956.3 Alkaloid TRI/TRII medium pass
Potra176007g27855.1 Alkaloid TRI/TRII low borderline
Potra177896g27960.1 Alkaloid TRI/TRII medium pass
Potra179573g28025.1 Alkaloid TRI/TRII medium pass
Potra179573g28025.2 Alkaloid TRI/TRII medium pass
Potra179573g28025.3 Alkaloid TRI/TRII medium pass
Potra179573g28025.4 Alkaloid TRI/TRII medium pass
Potra001097g09561.1 Alkaloid TYDC_DDC medium borderline
Potra001097g09561.2 Alkaloid TYDC_DDC medium borderline
Potra001097g09561.3 Alkaloid TYDC_DDC medium borderline
Potra001097g09561.5 Alkaloid TYDC_DDC medium borderline
Potra001097g09561.6 Alkaloid TYDC_DDC medium borderline
Potra001556g12880.1 Alkaloid TYDC_DDC medium borderline
Potra001556g12880.2 Alkaloid TYDC_DDC medium borderline
Potra001932g15316.1 Alkaloid TYDC_DDC medium borderline
Potra001119g09889.1 Alkaloid XMT_MXMT_DXMT medium borderline
Potra003946g32458.1 Alkaloid XMT_MXMT_DXMT medium pass
Potra004254g24739.4 Alkaloid XMT_MXMT_DXMT medium borderline
Potra167663g27293.1 Alkaloid XMT_MXMT_DXMT medium borderline
Potra169714g27464.1 Alkaloid XMT_MXMT_DXMT medium borderline