PlantSME Plant secondary metabolism enzyme database

Populus tremula (populus_tremula)

Imported from atlas release summary for Populus tremula.

3319
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 927 20 BAHD (456) View species results
Alkaloid pathway 791 24 NMT (188) View species results
Phenylpropanoid pathway 711 13 POD (308) View species results
Flavonoid pathway 335 11 UFGT (164) View species results
Steroid pathway 312 13 CAS (122) View species results
Rosmarinic acid pathway 243 7 4CL (80) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2142 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 662 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Potra002472g18703.2 Flavonoid ANR low borderline
Potra002591g19481.1 Flavonoid ANR medium borderline
Potra002591g19481.2 Flavonoid ANR medium borderline
Potra006461g25689.1 Flavonoid ANR medium borderline
Potra009431g26356.1 Flavonoid ANR medium borderline
Potra009431g26356.2 Flavonoid ANR medium borderline
Potra167557g27286.1 Flavonoid ANR medium borderline
Potra167557g27286.2 Flavonoid ANR medium borderline
Potra167557g27286.3 Flavonoid ANR medium borderline
Potra170357g27510.1 Flavonoid ANR low borderline
Potra182534g28233.1 Flavonoid ANR medium borderline
Potra187611g28522.3 Flavonoid ANR low borderline
Potra193879g34598.1 Flavonoid ANR medium borderline
Potra194092g28921.1 Flavonoid ANR medium borderline
Potra194092g28921.2 Flavonoid ANR medium borderline
Potra194092g28921.3 Flavonoid ANR medium borderline
Potra194092g28921.5 Flavonoid ANR medium borderline
Potra200486g29516.1 Flavonoid ANR medium borderline
Potra200486g29516.2 Flavonoid ANR medium borderline
Potra000440g02424.1 Flavonoid ANS/LDOX medium borderline
Potra000440g02424.2 Flavonoid ANS/LDOX medium borderline
Potra000449g02531.1 Flavonoid ANS/LDOX medium borderline
Potra000618g04699.1 Flavonoid ANS/LDOX medium borderline
Potra000811g06457.1 Flavonoid ANS/LDOX medium borderline
Potra000932g07617.1 Flavonoid ANS/LDOX medium borderline
Potra000932g07617.2 Flavonoid ANS/LDOX medium borderline
Potra001209g10468.2 Flavonoid ANS/LDOX medium borderline
Potra001677g13741.1 Flavonoid ANS/LDOX medium borderline
Potra002372g18072.1 Flavonoid ANS/LDOX medium borderline
Potra002920g20310.1 Flavonoid ANS/LDOX medium borderline
Potra003664g22363.1 Flavonoid ANS/LDOX medium borderline
Potra003974g23895.3 Flavonoid ANS/LDOX medium borderline
Potra004572g25080.1 Flavonoid ANS/LDOX medium borderline
Potra166162g27215.1 Flavonoid ANS/LDOX medium borderline
Potra000503g03270.1 Flavonoid C4H medium borderline
Potra000508g03324.1 Flavonoid C4H medium borderline
Potra000686g05324.1 Flavonoid C4H medium borderline
Potra000726g35476.1 Flavonoid C4H medium borderline
Potra001039g08777.1 Flavonoid C4H low borderline
Potra001148g10006.1 Flavonoid C4H medium borderline
Potra001620g13330.1 Flavonoid C4H low borderline
Potra004073g24445.1 Flavonoid C4H low borderline
Potra004073g24445.2 Flavonoid C4H low borderline
Potra182600g28240.1 Flavonoid C4H medium pass
Potra182600g28240.2 Flavonoid C4H medium pass
Potra000452g02562.1 Flavonoid CHI low borderline
Potra000452g02562.2 Flavonoid CHI low borderline
Potra000452g02562.3 Flavonoid CHI low borderline
Potra000801g06348.1 Flavonoid CHI medium pass
Potra000801g06348.2 Flavonoid CHI medium pass