PlantSME Plant secondary metabolism enzyme database

Raphanus sativus (raphanus_sativus)

Imported from atlas release summary for Raphanus sativus.

1922
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 609 20 BAHD (266) View species results
Phenylpropanoid pathway 426 11 POD (182) View species results
Alkaloid pathway 406 20 7DLGT (73) View species results
Flavonoid pathway 216 12 UFGT (141) View species results
Rosmarinic acid pathway 156 7 C4H (66) View species results
Steroid pathway 109 12 SMT1/SMT2/SMT3 (47) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1916 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Rsat03G0032360 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0000620 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0000630 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0000640 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0001230 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0016720 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0021200 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0022380 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0027420 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0034860 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0040140 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0042490 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0043870 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0050910 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0051760 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0051970 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0055530 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0055930 Steroid BR6OX2/CYP85A2 low borderline
Rsat04G0061160 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0000950 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0007860 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0007880 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0007900 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0007910 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0009800 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0009810 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0016220 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0021020 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0033150 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0033340 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0043560 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0043580 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0043600 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0047930 Steroid BR6OX2/CYP85A2 low borderline
Rsat05G0057590 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0003720 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0013980 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0020700 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0023260 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0023900 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0023950 Steroid BR6OX2/CYP85A2 low borderline
Rsat06G0031600 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0000200 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0005040 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0011600 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0018460 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0019080 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0022310 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0022320 Steroid BR6OX2/CYP85A2 low borderline
Rsat07G0024860 Steroid BR6OX2/CYP85A2 low borderline