PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ021765 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ022140 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ022211 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ022550 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ022676 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ022677 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ022723 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ022773 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ022942 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ023014 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ023487 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ023557 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ024214 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ024444 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ024445 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ024768 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ025320 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ026130 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ026603 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ027029 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ027067 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ027068 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ027316 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ027484 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ028403 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ028859 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ030219 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ030872 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ030874 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ030988 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ031854 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ032334 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ032591 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ032893 Alkaloid NMT low borderline
silene_latifolia_GWHPCBIJ033167 Alkaloid NMT medium borderline
silene_latifolia_GWHPCBIJ033420 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ033421 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ035611 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ035683 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ035993 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ035994 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ035995 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ036163 Alkaloid NMT medium pass
silene_latifolia_GWHPCBIJ000208 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ000209 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ000210 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ000933 Alkaloid PMT medium pass
silene_latifolia_GWHPCBIJ003960 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ003961 Alkaloid PMT medium borderline
silene_latifolia_GWHPCBIJ005878 Alkaloid PMT low borderline