PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ025031 Alkaloid TYDC_DDC medium borderline
silene_latifolia_GWHPCBIJ025033 Alkaloid TYDC_DDC medium borderline
silene_latifolia_GWHPCBIJ025034 Alkaloid TYDC_DDC medium borderline
silene_latifolia_GWHPCBIJ025035 Alkaloid TYDC_DDC medium borderline
silene_latifolia_GWHPCBIJ025037 Alkaloid TYDC_DDC medium borderline
silene_latifolia_GWHPCBIJ001611 Alkaloid XMT_MXMT_DXMT medium borderline
silene_latifolia_GWHPCBIJ010990 Alkaloid XMT_MXMT_DXMT medium borderline
silene_latifolia_GWHPCBIJ010991 Alkaloid XMT_MXMT_DXMT medium pass
silene_latifolia_GWHPCBIJ011592 Alkaloid XMT_MXMT_DXMT low borderline
silene_latifolia_GWHPCBIJ015578 Alkaloid XMT_MXMT_DXMT medium borderline
silene_latifolia_GWHPCBIJ015678 Alkaloid XMT_MXMT_DXMT medium borderline
silene_latifolia_GWHPCBIJ028563 Alkaloid XMT_MXMT_DXMT medium borderline
silene_latifolia_GWHPCBIJ000748 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ001196 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ001961 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ002754 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ002755 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ003767 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ004329 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ004808 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ006590 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ007881 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ007897 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ009873 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ010186 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ011403 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ012030 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ012872 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ012873 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ012886 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ012887 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ014712 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ014937 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ016651 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ017087 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ017911 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ019380 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ020350 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ020408 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ020409 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ020613 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ021446 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ022972 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ023488 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ025885 Flavonoid 4CL medium pass
silene_latifolia_GWHPCBIJ026853 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ027158 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ028835 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ030003 Flavonoid 4CL low borderline
silene_latifolia_GWHPCBIJ030636 Flavonoid 4CL medium pass