PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

2119
Candidate Protein Records
1810
Pathway-Level Records
4435
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ031313 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ032441 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ032442 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ032794 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ032994 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034481 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034484 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034488 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034500 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034675 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ034903 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035140 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035364 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035365 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035369 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035370 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ035659 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035796 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ035797 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ036122 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ036351 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ036780 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ036812 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ036981 Flavonoid IFS medium borderline
silene_latifolia_GWHPCBIJ037507 Flavonoid IFS low borderline
silene_latifolia_GWHPCBIJ002387 Flavonoid PAL high pass
silene_latifolia_GWHPCBIJ014289 Flavonoid PAL high pass
silene_latifolia_GWHPCBIJ023919 Flavonoid PAL high pass
silene_latifolia_GWHPCBIJ000575 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ001645 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ001954 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002270 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ002329 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002338 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002375 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002678 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ002679 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002822 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ002824 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ002959 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ003226 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ003228 Flavonoid UFGT low borderline
silene_latifolia_GWHPCBIJ003470 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ004678 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ004878 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ005057 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ005087 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ005460 Flavonoid UFGT medium pass
silene_latifolia_GWHPCBIJ005711 Flavonoid UFGT high pass
silene_latifolia_GWHPCBIJ005802 Flavonoid UFGT medium pass