PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ037270 Alkaloid 7DLGT medium pass
silene_latifolia_GWHPCBIJ037456 Alkaloid 7DLGT low borderline
silene_latifolia_GWHPCBIJ000017 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ000454 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ000929 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ005484 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ006068 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ006069 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ007056 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ009882 Alkaloid 7DLH medium pass
silene_latifolia_GWHPCBIJ011176 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ011525 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ011650 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ011652 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013330 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013331 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013333 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013334 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013335 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013336 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013338 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ013405 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ015900 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ018238 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ018251 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ018684 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ022089 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ022764 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ023962 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ026085 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ026088 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ027164 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ027412 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ032754 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ032755 Alkaloid 7DLH medium pass
silene_latifolia_GWHPCBIJ032988 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ034681 Alkaloid 7DLH low borderline
silene_latifolia_GWHPCBIJ035808 Alkaloid 7DLH medium borderline
silene_latifolia_GWHPCBIJ035809 Alkaloid 7DLH medium pass
silene_latifolia_GWHPCBIJ001780 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ002568 Alkaloid 8HGO low borderline
silene_latifolia_GWHPCBIJ016119 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ023577 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ025101 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ026168 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ030660 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ030662 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ030667 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ030855 Alkaloid 8HGO medium borderline
silene_latifolia_GWHPCBIJ034515 Alkaloid 8HGO low borderline