PlantSME Plant secondary metabolism enzyme database

Silene latifolia (silene_latifolia)

Imported from atlas release summary for Silene latifolia.

1810
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 533 18 BAHD (209) View species results
Alkaloid pathway 408 22 7DLGT (78) View species results
Phenylpropanoid pathway 369 11 POD (160) View species results
Flavonoid pathway 250 11 UFGT (172) View species results
Rosmarinic acid pathway 161 7 C4H (57) View species results
Steroid pathway 89 12 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1595 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
silene_latifolia_GWHPCBIJ003477 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003479 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003481 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003483 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003484 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003485 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003486 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003489 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ003495 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ004408 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ004409 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ004413 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ004414 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ004416 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ004417 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ005068 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ005889 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ005916 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ006506 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ006594 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ006969 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ007087 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ007754 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ007861 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ007892 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ009871 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ010049 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ010939 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ011849 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ012922 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ013704 Alkaloid CODM/T6ODM low borderline
silene_latifolia_GWHPCBIJ013858 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ014985 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ015394 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ015797 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ015798 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ016088 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ016370 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ016872 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ016892 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ017312 Alkaloid CODM/T6ODM low borderline
silene_latifolia_GWHPCBIJ017716 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ018217 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ018218 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ018237 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ018241 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ020267 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ020763 Alkaloid CODM/T6ODM medium borderline
silene_latifolia_GWHPCBIJ021350 Alkaloid CODM/T6ODM low borderline
silene_latifolia_GWHPCBIJ021626 Alkaloid CODM/T6ODM medium borderline