PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI18313.1[Trifolium Alkaloid STR medium pass
MCI19435.1[Trifolium Alkaloid STR medium pass
MCI22678.1[Trifolium Alkaloid STR medium pass
MCI23760.1[Trifolium Alkaloid STR medium pass
MCI24789.1[Trifolium Alkaloid STR medium pass
MCI27208.1[Trifolium Alkaloid STR medium pass
MCI29848.1[Trifolium Alkaloid STR medium pass
MCI32213.1[Trifolium Alkaloid STR medium pass
MCI35416.1[Trifolium Alkaloid STR low borderline
MCI38417.1[Trifolium Alkaloid STR medium pass
MCI39379.1[Trifolium Alkaloid STR medium pass
MCI43947.1[Trifolium Alkaloid STR medium pass
MCI64983.1[Trifolium Alkaloid STR medium pass
MCI73112.1[Trifolium Alkaloid STR medium pass
MCI75281.1[Trifolium Alkaloid STR medium pass
MCI75676.1[Trifolium Alkaloid STR low borderline
MCI78575.1[Trifolium Alkaloid STR medium pass
MCI87561.1[Trifolium Alkaloid STR medium pass
MCH81900.1[Trifolium Alkaloid T16H medium borderline
MCH85957.1[Trifolium Alkaloid T16H low borderline
MCH88644.1[Trifolium Alkaloid T16H low borderline
MCH89641.1[Trifolium Alkaloid T16H medium borderline
MCH91203.1[Trifolium Alkaloid T16H low borderline
MCH92120.1[Trifolium Alkaloid T16H medium borderline
MCH92387.1[Trifolium Alkaloid T16H low borderline
MCH93096.1[Trifolium Alkaloid T16H low borderline
MCH93922.1[Trifolium Alkaloid T16H medium pass
MCH94488.1[Trifolium Alkaloid T16H medium borderline
MCH96324.1[Trifolium Alkaloid T16H medium pass
MCH98465.1[Trifolium Alkaloid T16H medium pass
MCI01502.1[Trifolium Alkaloid T16H medium borderline
MCI02088.1[Trifolium Alkaloid T16H medium borderline
MCI02775.1[Trifolium Alkaloid T16H medium borderline
MCI02858.1[Trifolium Alkaloid T16H medium borderline
MCI02881.1[Trifolium Alkaloid T16H medium borderline
MCI04326.1[Trifolium Alkaloid T16H low borderline
MCI05312.1[Trifolium Alkaloid T16H medium borderline
MCI08640.1[Trifolium Alkaloid T16H medium pass
MCI11099.1[Trifolium Alkaloid T16H low borderline
MCI12231.1[Trifolium Alkaloid T16H medium borderline
MCI14302.1[Trifolium Alkaloid T16H medium borderline
MCI14488.1[Trifolium Alkaloid T16H medium borderline
MCI14785.1[Trifolium Alkaloid T16H low borderline
MCI16033.1[Trifolium Alkaloid T16H low borderline
MCI17375.1[Trifolium Alkaloid T16H low borderline
MCI18048.1[Trifolium Alkaloid T16H low borderline
MCI18097.1[Trifolium Alkaloid T16H low borderline
MCI19005.1[Trifolium Alkaloid T16H medium borderline
MCI22248.1[Trifolium Alkaloid T16H medium pass
MCI22328.1[Trifolium Alkaloid T16H low borderline