PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI25835.1[Trifolium Alkaloid T16H medium borderline
MCI26667.1[Trifolium Alkaloid T16H medium borderline
MCI27820.1[Trifolium Alkaloid T16H medium borderline
MCI30778.1[Trifolium Alkaloid T16H low borderline
MCI31819.1[Trifolium Alkaloid T16H low borderline
MCI32211.1[Trifolium Alkaloid T16H medium borderline
MCI33410.1[Trifolium Alkaloid T16H medium borderline
MCI36636.1[Trifolium Alkaloid T16H medium borderline
MCI36764.1[Trifolium Alkaloid T16H medium borderline
MCI37579.1[Trifolium Alkaloid T16H low borderline
MCI55851.1[Trifolium Alkaloid T16H medium borderline
MCI65251.1[Trifolium Alkaloid T16H medium borderline
MCI97498.1[Trifolium Alkaloid T16H low borderline
MCH81831.1[Trifolium Alkaloid T3O low borderline
MCH81927.1[Trifolium Alkaloid T3O medium borderline
MCH84897.1[Trifolium Alkaloid T3O medium pass
MCH85733.1[Trifolium Alkaloid T3O medium borderline
MCH90602.1[Trifolium Alkaloid T3O medium borderline
MCH90827.1[Trifolium Alkaloid T3O medium pass
MCH91510.1[Trifolium Alkaloid T3O medium borderline
MCH93475.1[Trifolium Alkaloid T3O low borderline
MCH96344.1[Trifolium Alkaloid T3O low borderline
MCH97986.1[Trifolium Alkaloid T3O medium borderline
MCH98798.1[Trifolium Alkaloid T3O medium borderline
MCH99182.1[Trifolium Alkaloid T3O medium borderline
MCH99982.1[Trifolium Alkaloid T3O low borderline
MCI00328.1[Trifolium Alkaloid T3O medium borderline
MCI00341.1[Trifolium Alkaloid T3O medium borderline
MCI01678.1[Trifolium Alkaloid T3O medium borderline
MCI01834.1[Trifolium Alkaloid T3O medium borderline
MCI05476.1[Trifolium Alkaloid T3O medium borderline
MCI06043.1[Trifolium Alkaloid T3O medium borderline
MCI06203.1[Trifolium Alkaloid T3O medium pass
MCI06404.1[Trifolium Alkaloid T3O medium borderline
MCI06797.1[Trifolium Alkaloid T3O low borderline
MCI08966.1[Trifolium Alkaloid T3O low borderline
MCI10625.1[Trifolium Alkaloid T3O medium borderline
MCI10924.1[Trifolium Alkaloid T3O medium borderline
MCI11026.1[Trifolium Alkaloid T3O medium borderline
MCI12734.1[Trifolium Alkaloid T3O medium pass
MCI14175.1[Trifolium Alkaloid T3O low borderline
MCI14679.1[Trifolium Alkaloid T3O medium borderline
MCI16849.1[Trifolium Alkaloid T3O medium borderline
MCI18089.1[Trifolium Alkaloid T3O low borderline
MCI18498.1[Trifolium Alkaloid T3O medium pass
MCI19301.1[Trifolium Alkaloid T3O low borderline
MCI19302.1[Trifolium Alkaloid T3O medium borderline
MCI22029.1[Trifolium Alkaloid T3O low borderline
MCI22212.1[Trifolium Alkaloid T3O medium pass
MCI23723.1[Trifolium Alkaloid T3O medium borderline