PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI24933.1[Trifolium Alkaloid T3O medium borderline
MCI26174.1[Trifolium Alkaloid T3O medium borderline
MCI26199.1[Trifolium Alkaloid T3O medium pass
MCI26700.1[Trifolium Alkaloid T3O medium borderline
MCI28928.1[Trifolium Alkaloid T3O medium borderline
MCI29357.1[Trifolium Alkaloid T3O medium borderline
MCI29677.1[Trifolium Alkaloid T3O medium borderline
MCI29991.1[Trifolium Alkaloid T3O low borderline
MCI34127.1[Trifolium Alkaloid T3O medium borderline
MCI42080.1[Trifolium Alkaloid T3O medium pass
MCI46382.1[Trifolium Alkaloid T3O medium borderline
MCI47105.1[Trifolium Alkaloid T3O medium borderline
MCI53444.1[Trifolium Alkaloid T3O medium borderline
MCI54707.1[Trifolium Alkaloid T3O low borderline
MCI55375.1[Trifolium Alkaloid T3O low borderline
MCI57189.1[Trifolium Alkaloid T3O medium borderline
MCI69400.1[Trifolium Alkaloid T3O medium borderline
MCI72952.1[Trifolium Alkaloid T3O low borderline
MCI73595.1[Trifolium Alkaloid T3O medium borderline
MCI90378.1[Trifolium Alkaloid T3O low borderline
MCH88477.1[Trifolium Alkaloid TDC low borderline
MCI11296.1[Trifolium Alkaloid TDC low borderline
MCH84718.1[Trifolium Alkaloid TRI/TRII medium pass
MCH84719.1[Trifolium Alkaloid TRI/TRII medium pass
MCH85337.1[Trifolium Alkaloid TRI/TRII medium pass
MCH87046.1[Trifolium Alkaloid TRI/TRII medium pass
MCH88667.1[Trifolium Alkaloid TRI/TRII medium pass
MCH94421.1[Trifolium Alkaloid TRI/TRII medium pass
MCH99150.1[Trifolium Alkaloid TRI/TRII medium pass
MCI01105.1[Trifolium Alkaloid TRI/TRII medium pass
MCI01769.1[Trifolium Alkaloid TRI/TRII medium pass
MCI03654.1[Trifolium Alkaloid TRI/TRII medium pass
MCI07052.1[Trifolium Alkaloid TRI/TRII medium pass
MCI11833.1[Trifolium Alkaloid TRI/TRII medium pass
MCI16531.1[Trifolium Alkaloid TRI/TRII medium pass
MCI16792.1[Trifolium Alkaloid TRI/TRII medium pass
MCI23897.1[Trifolium Alkaloid TRI/TRII medium pass
MCI29549.1[Trifolium Alkaloid TRI/TRII medium pass
MCI29719.1[Trifolium Alkaloid TRI/TRII low borderline
MCI47221.1[Trifolium Alkaloid TRI/TRII medium pass
MCI61045.1[Trifolium Alkaloid TRI/TRII medium pass
MCI61163.1[Trifolium Alkaloid TRI/TRII low borderline
MCI63677.1[Trifolium Alkaloid TRI/TRII low borderline
MCI63854.1[Trifolium Alkaloid TRI/TRII medium pass
MCH80120.1[Trifolium Alkaloid XMT_MXMT_DXMT medium borderline
MCI60634.1[Trifolium Alkaloid XMT_MXMT_DXMT low borderline