PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
MCI26174.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI26700.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI27549.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI27590.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI29357.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI30787.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI31313.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI46382.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI47105.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI53444.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI57189.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI69400.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI72952.1[Trifolium Steroid BR6OX2/CYP85A2 medium borderline
MCI73280.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCI73595.1[Trifolium Steroid BR6OX2/CYP85A2 low borderline
MCH79308.1[Trifolium Steroid CAS medium pass
MCH79349.1[Trifolium Steroid CAS low borderline
MCH81172.1[Trifolium Steroid CAS medium pass
MCH81727.1[Trifolium Steroid CAS medium pass
MCH82044.1[Trifolium Steroid CAS medium pass
MCH83455.1[Trifolium Steroid CAS medium pass
MCH85199.1[Trifolium Steroid CAS medium pass
MCH85417.1[Trifolium Steroid CAS medium pass
MCH87194.1[Trifolium Steroid CAS medium pass
MCH87963.1[Trifolium Steroid CAS medium pass
MCH88055.1[Trifolium Steroid CAS medium pass
MCH88126.1[Trifolium Steroid CAS low borderline
MCH90841.1[Trifolium Steroid CAS medium pass
MCH90905.1[Trifolium Steroid CAS medium pass
MCH91539.1[Trifolium Steroid CAS medium pass
MCH91787.1[Trifolium Steroid CAS medium pass
MCH94945.1[Trifolium Steroid CAS medium pass
MCH97920.1[Trifolium Steroid CAS medium pass
MCH99029.1[Trifolium Steroid CAS medium pass
MCH99382.1[Trifolium Steroid CAS medium pass
MCI00917.1[Trifolium Steroid CAS medium pass
MCI01224.1[Trifolium Steroid CAS medium pass
MCI02068.1[Trifolium Steroid CAS medium pass
MCI02321.1[Trifolium Steroid CAS medium pass
MCI03864.1[Trifolium Steroid CAS medium pass
MCI07697.1[Trifolium Steroid CAS medium pass
MCI08382.1[Trifolium Steroid CAS medium pass
MCI08651.1[Trifolium Steroid CAS medium pass
MCI10627.1[Trifolium Steroid CAS medium pass
MCI11016.1[Trifolium Steroid CAS medium pass
MCI12223.1[Trifolium Steroid CAS medium pass
MCI15779.1[Trifolium Steroid CAS medium pass
MCI15876.1[Trifolium Steroid CAS medium pass
MCI18378.1[Trifolium Steroid CAS medium pass
MCI19529.1[Trifolium Steroid CAS medium pass