PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
MCI23178.1[Trifolium Steroid CAS medium pass
MCI25331.1[Trifolium Steroid CAS medium pass
MCI26080.1[Trifolium Steroid CAS medium pass
MCI32563.1[Trifolium Steroid CAS medium pass
MCI35650.1[Trifolium Steroid CAS medium pass
MCI43140.1[Trifolium Steroid CAS medium pass
MCI52578.1[Trifolium Steroid CAS medium pass
MCI68626.1[Trifolium Steroid CAS medium pass
MCI77439.1[Trifolium Steroid CAS medium pass
MCI78381.1[Trifolium Steroid CAS medium pass
MCI79824.1[Trifolium Steroid CAS medium pass
MCI85678.1[Trifolium Steroid CAS medium pass
MCI90044.1[Trifolium Steroid CAS medium pass
MCI95384.1[Trifolium Steroid CAS medium pass
MCI97051.1[Trifolium Steroid CAS medium pass
MCH84896.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCH89289.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCH98033.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCH99299.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCI04326.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCI09581.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI10766.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI11099.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI16033.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI16495.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI16820.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCI18089.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCI24325.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI29991.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCI30067.1[Trifolium Steroid CPD/CYP90A1 medium borderline
MCI69644.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI94209.1[Trifolium Steroid CPD/CYP90A1 low borderline
MCI23706.1[Trifolium Steroid CPI1 high pass
MCH81900.1[Trifolium Steroid CYP51G1 medium borderline
MCH81927.1[Trifolium Steroid CYP51G1 medium borderline
MCH90602.1[Trifolium Steroid CYP51G1 medium borderline
MCH92120.1[Trifolium Steroid CYP51G1 medium borderline
MCH97986.1[Trifolium Steroid CYP51G1 medium borderline
MCH98798.1[Trifolium Steroid CYP51G1 medium borderline
MCI00328.1[Trifolium Steroid CYP51G1 medium borderline
MCI02775.1[Trifolium Steroid CYP51G1 medium borderline
MCI05476.1[Trifolium Steroid CYP51G1 medium borderline
MCI14488.1[Trifolium Steroid CYP51G1 medium borderline
MCI15256.1[Trifolium Steroid CYP51G1 medium borderline
MCI16069.1[Trifolium Steroid CYP51G1 medium borderline
MCI19302.1[Trifolium Steroid CYP51G1 medium borderline
MCI25835.1[Trifolium Steroid CYP51G1 medium borderline
MCI40623.1[Trifolium Steroid CYP51G1 low borderline
MCI44541.1[Trifolium Steroid CYP51G1 low borderline
MCI47614.1[Trifolium Steroid CYP51G1 low borderline