PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
MCI55851.1[Trifolium Steroid CYP51G1 low borderline
MCI60454.1[Trifolium Steroid CYP51G1 low borderline
MCI78735.1[Trifolium Steroid CYP51G1 low borderline
MCI80243.1[Trifolium Steroid CYP51G1 low borderline
MCI84512.1[Trifolium Steroid CYP51G1 low borderline
MCI87524.1[Trifolium Steroid CYP51G1 low borderline
MCI88520.1[Trifolium Steroid CYP51G1 low borderline
MCI90559.1[Trifolium Steroid CYP51G1 low borderline
MCI90807.1[Trifolium Steroid CYP51G1 low borderline
MCI91310.1[Trifolium Steroid CYP51G1 low borderline
MCH84897.1[Trifolium Steroid CYP90D1 medium borderline
MCH85733.1[Trifolium Steroid CYP90D1 low borderline
MCH89641.1[Trifolium Steroid CYP90D1 low borderline
MCH91894.1[Trifolium Steroid CYP90D1 low borderline
MCH93475.1[Trifolium Steroid CYP90D1 medium borderline
MCH94682.1[Trifolium Steroid CYP90D1 medium borderline
MCH99182.1[Trifolium Steroid CYP90D1 low borderline
MCI06203.1[Trifolium Steroid CYP90D1 low borderline
MCI10394.1[Trifolium Steroid CYP90D1 low borderline
MCI12629.1[Trifolium Steroid CYP90D1 low borderline
MCI14302.1[Trifolium Steroid CYP90D1 low borderline
MCI19005.1[Trifolium Steroid CYP90D1 low borderline
MCI23723.1[Trifolium Steroid CYP90D1 low borderline
MCI24448.1[Trifolium Steroid CYP90D1 low borderline
MCI26667.1[Trifolium Steroid CYP90D1 low borderline
MCI30171.1[Trifolium Steroid CYP90D1 low borderline
MCI33533.1[Trifolium Steroid CYP90D1 medium borderline
MCI36247.1[Trifolium Steroid CYP90D1 low borderline
MCI36636.1[Trifolium Steroid CYP90D1 low borderline
MCI36764.1[Trifolium Steroid CYP90D1 low borderline
MCI54707.1[Trifolium Steroid CYP90D1 low borderline
MCI56004.1[Trifolium Steroid CYP90D1 low borderline
MCI76673.1[Trifolium Steroid CYP90D1 low borderline
MCI97004.1[Trifolium Steroid CYP90D1 low borderline
MCI03091.1[Trifolium Steroid DWF1 medium pass
MCI11368.1[Trifolium Steroid DWF1 medium pass
MCI21890.1[Trifolium Steroid DWF1 medium pass
MCI23023.1[Trifolium Steroid DWF1 medium pass
MCI32363.1[Trifolium Steroid DWF1 low borderline
MCI40875.1[Trifolium Steroid DWF1 low borderline
MCH80724.1[Trifolium Steroid DWF4/CYP90B1 low borderline
MCH81831.1[Trifolium Steroid DWF4/CYP90B1 medium borderline
MCH85580.1[Trifolium Steroid DWF4/CYP90B1 low borderline
MCH90827.1[Trifolium Steroid DWF4/CYP90B1 medium borderline
MCH91099.1[Trifolium Steroid DWF4/CYP90B1 medium borderline
MCH91405.1[Trifolium Steroid DWF4/CYP90B1 low borderline
MCH91510.1[Trifolium Steroid DWF4/CYP90B1 low borderline
MCH92442.1[Trifolium Steroid DWF4/CYP90B1 low borderline
MCH93096.1[Trifolium Steroid DWF4/CYP90B1 low borderline
MCH98173.1[Trifolium Steroid DWF4/CYP90B1 low borderline