PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
MCI30506.1[Trifolium Terpenoid BAHD medium pass
MCI30777.1[Trifolium Terpenoid BAHD medium pass
MCI30831.1[Trifolium Terpenoid BAHD medium pass
MCI31395.1[Trifolium Terpenoid BAHD medium pass
MCI31491.1[Trifolium Terpenoid BAHD medium pass
MCI32517.1[Trifolium Terpenoid BAHD medium pass
MCI32579.1[Trifolium Terpenoid BAHD medium pass
MCI33033.1[Trifolium Terpenoid BAHD medium pass
MCI34427.1[Trifolium Terpenoid BAHD medium pass
MCI36562.1[Trifolium Terpenoid BAHD medium pass
MCI37111.1[Trifolium Terpenoid BAHD medium pass
MCI38366.1[Trifolium Terpenoid BAHD medium pass
MCI42874.1[Trifolium Terpenoid BAHD medium pass
MCI44052.1[Trifolium Terpenoid BAHD medium pass
MCI44344.1[Trifolium Terpenoid BAHD medium pass
MCI44767.1[Trifolium Terpenoid BAHD medium pass
MCI48144.1[Trifolium Terpenoid BAHD medium pass
MCI49967.1[Trifolium Terpenoid BAHD medium pass
MCI55201.1[Trifolium Terpenoid BAHD medium pass
MCI56924.1[Trifolium Terpenoid BAHD medium pass
MCI57538.1[Trifolium Terpenoid BAHD medium pass
MCI60422.1[Trifolium Terpenoid BAHD medium pass
MCI62937.1[Trifolium Terpenoid BAHD medium pass
MCI65102.1[Trifolium Terpenoid BAHD medium pass
MCI65898.1[Trifolium Terpenoid BAHD medium borderline
MCI66251.1[Trifolium Terpenoid BAHD medium pass
MCI69684.1[Trifolium Terpenoid BAHD medium pass
MCI69742.1[Trifolium Terpenoid BAHD medium borderline
MCI70647.1[Trifolium Terpenoid BAHD medium pass
MCI71674.1[Trifolium Terpenoid BAHD medium pass
MCI77612.1[Trifolium Terpenoid BAHD medium pass
MCI79494.1[Trifolium Terpenoid BAHD medium pass
MCH89819.1[Trifolium Terpenoid CMK/IspE low borderline
MCH90389.1[Trifolium Terpenoid CMK/IspE medium pass
MCI16132.1[Trifolium Terpenoid CMK/IspE medium pass
MCH82174.1[Trifolium Terpenoid CYP71 medium pass
MCH89641.1[Trifolium Terpenoid CYP71 medium borderline
MCH94488.1[Trifolium Terpenoid CYP71 medium borderline
MCH96911.1[Trifolium Terpenoid CYP71 medium pass
MCH97426.1[Trifolium Terpenoid CYP71 medium pass
MCH97468.1[Trifolium Terpenoid CYP71 medium pass
MCH97986.1[Trifolium Terpenoid CYP71 medium borderline
MCI00341.1[Trifolium Terpenoid CYP71 medium borderline
MCI02088.1[Trifolium Terpenoid CYP71 medium borderline
MCI04979.1[Trifolium Terpenoid CYP71 medium pass
MCI05127.1[Trifolium Terpenoid CYP71 medium pass
MCI05312.1[Trifolium Terpenoid CYP71 medium borderline
MCI08987.1[Trifolium Terpenoid CYP71 low borderline
MCI14302.1[Trifolium Terpenoid CYP71 medium borderline
MCI14679.1[Trifolium Terpenoid CYP71 medium borderline