PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
MCI24933.1[Trifolium Terpenoid CYP71 medium borderline
MCI26667.1[Trifolium Terpenoid CYP71 medium borderline
MCI26700.1[Trifolium Terpenoid CYP71 medium borderline
MCI28928.1[Trifolium Terpenoid CYP71 low borderline
MCI29357.1[Trifolium Terpenoid CYP71 medium borderline
MCI32211.1[Trifolium Terpenoid CYP71 medium pass
MCI33410.1[Trifolium Terpenoid CYP71 medium borderline
MCI34757.1[Trifolium Terpenoid CYP71 low borderline
MCI38287.1[Trifolium Terpenoid CYP71 medium pass
MCI47105.1[Trifolium Terpenoid CYP71 medium borderline
MCI56004.1[Trifolium Terpenoid CYP71 medium borderline
MCH81900.1[Trifolium Terpenoid CYP76 low borderline
MCH81927.1[Trifolium Terpenoid CYP76 medium borderline
MCH84309.1[Trifolium Terpenoid CYP76 medium borderline
MCH84897.1[Trifolium Terpenoid CYP76 medium pass
MCH85580.1[Trifolium Terpenoid CYP76 low borderline
MCH85733.1[Trifolium Terpenoid CYP76 medium borderline
MCH86374.1[Trifolium Terpenoid CYP76 medium pass
MCH88255.1[Trifolium Terpenoid CYP76 medium borderline
MCH89289.1[Trifolium Terpenoid CYP76 medium pass
MCH90602.1[Trifolium Terpenoid CYP76 medium borderline
MCH91510.1[Trifolium Terpenoid CYP76 medium borderline
MCH92120.1[Trifolium Terpenoid CYP76 medium pass
MCH92442.1[Trifolium Terpenoid CYP76 medium borderline
MCH94345.1[Trifolium Terpenoid CYP76 medium pass
MCH94682.1[Trifolium Terpenoid CYP76 medium pass
MCH97295.1[Trifolium Terpenoid CYP76 medium pass
MCH97679.1[Trifolium Terpenoid CYP76 low borderline
MCH98465.1[Trifolium Terpenoid CYP76 low borderline
MCH98749.1[Trifolium Terpenoid CYP76 low borderline
MCH98798.1[Trifolium Terpenoid CYP76 medium borderline
MCI00328.1[Trifolium Terpenoid CYP76 medium borderline
MCI01502.1[Trifolium Terpenoid CYP76 low borderline
MCI01678.1[Trifolium Terpenoid CYP76 medium borderline
MCI01834.1[Trifolium Terpenoid CYP76 medium pass
MCI02775.1[Trifolium Terpenoid CYP76 medium borderline
MCI05476.1[Trifolium Terpenoid CYP76 medium borderline
MCI06043.1[Trifolium Terpenoid CYP76 medium borderline
MCI06404.1[Trifolium Terpenoid CYP76 medium borderline
MCI06797.1[Trifolium Terpenoid CYP76 low borderline
MCI07879.1[Trifolium Terpenoid CYP76 low borderline
MCI09194.1[Trifolium Terpenoid CYP76 medium pass
MCI10625.1[Trifolium Terpenoid CYP76 medium pass
MCI11026.1[Trifolium Terpenoid CYP76 medium pass
MCI12629.1[Trifolium Terpenoid CYP76 medium pass
MCI12647.1[Trifolium Terpenoid CYP76 medium borderline
MCI13009.1[Trifolium Terpenoid CYP76 low borderline
MCI14488.1[Trifolium Terpenoid CYP76 medium borderline
MCI15256.1[Trifolium Terpenoid CYP76 medium borderline
MCI15960.1[Trifolium Terpenoid CYP76 medium borderline