PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
MCH99219.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI01502.1[Trifolium Phenylpropanoid C4H/CYP73A medium borderline
MCI01834.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI02881.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI07879.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI13009.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI18048.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI22328.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI30875.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI34692.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI37579.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI43793.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI53444.1[Trifolium Phenylpropanoid C4H/CYP73A medium borderline
MCI57977.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI69400.1[Trifolium Phenylpropanoid C4H/CYP73A medium borderline
MCI73595.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCI97498.1[Trifolium Phenylpropanoid C4H/CYP73A low borderline
MCH80026.1[Trifolium Phenylpropanoid CAD medium pass
MCH80151.1[Trifolium Phenylpropanoid CAD medium borderline
MCH83094.1[Trifolium Phenylpropanoid CAD medium pass
MCH84997.1[Trifolium Phenylpropanoid CAD medium pass
MCH85509.1[Trifolium Phenylpropanoid CAD medium pass
MCH85608.1[Trifolium Phenylpropanoid CAD medium pass
MCH87007.1[Trifolium Phenylpropanoid CAD medium pass
MCH89152.1[Trifolium Phenylpropanoid CAD medium borderline
MCH90139.1[Trifolium Phenylpropanoid CAD medium pass
MCH96073.1[Trifolium Phenylpropanoid CAD medium borderline
MCH99362.1[Trifolium Phenylpropanoid CAD low borderline
MCI01704.1[Trifolium Phenylpropanoid CAD medium pass
MCI03612.1[Trifolium Phenylpropanoid CAD medium pass
MCI03900.1[Trifolium Phenylpropanoid CAD medium pass
MCI06903.1[Trifolium Phenylpropanoid CAD medium borderline
MCI06934.1[Trifolium Phenylpropanoid CAD medium pass
MCI06945.1[Trifolium Phenylpropanoid CAD medium borderline
MCI07390.1[Trifolium Phenylpropanoid CAD medium pass
MCI07450.1[Trifolium Phenylpropanoid CAD medium borderline
MCI07640.1[Trifolium Phenylpropanoid CAD medium borderline
MCI08331.1[Trifolium Phenylpropanoid CAD medium borderline
MCI10082.1[Trifolium Phenylpropanoid CAD medium pass
MCI10148.1[Trifolium Phenylpropanoid CAD medium pass
MCI11436.1[Trifolium Phenylpropanoid CAD medium pass
MCI12072.1[Trifolium Phenylpropanoid CAD medium pass
MCI12939.1[Trifolium Phenylpropanoid CAD medium pass
MCI13077.1[Trifolium Phenylpropanoid CAD medium pass
MCI13654.1[Trifolium Phenylpropanoid CAD medium borderline
MCI15581.1[Trifolium Phenylpropanoid CAD medium borderline
MCI15843.1[Trifolium Phenylpropanoid CAD medium pass
MCI16140.1[Trifolium Phenylpropanoid CAD medium pass
MCI17219.1[Trifolium Phenylpropanoid CAD medium borderline
MCI18378.1[Trifolium Phenylpropanoid CAD medium pass