PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1627
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
MCI18382.1[Trifolium Phenylpropanoid CAD medium borderline
MCI20330.1[Trifolium Phenylpropanoid CAD medium borderline
MCI25967.1[Trifolium Phenylpropanoid CAD medium borderline
MCI27978.1[Trifolium Phenylpropanoid CAD medium borderline
MCI28769.1[Trifolium Phenylpropanoid CAD medium borderline
MCI30134.1[Trifolium Phenylpropanoid CAD medium pass
MCI42462.1[Trifolium Phenylpropanoid CAD medium pass
MCI77870.1[Trifolium Phenylpropanoid CAD medium pass
MCI83336.1[Trifolium Phenylpropanoid CAD medium pass
MCH84228.1[Trifolium Phenylpropanoid CCR medium pass
MCH85483.1[Trifolium Phenylpropanoid CCR low borderline
MCH85921.1[Trifolium Phenylpropanoid CCR medium borderline
MCH86055.1[Trifolium Phenylpropanoid CCR medium borderline
MCH87554.1[Trifolium Phenylpropanoid CCR medium borderline
MCH88293.1[Trifolium Phenylpropanoid CCR medium borderline
MCH95080.1[Trifolium Phenylpropanoid CCR medium borderline
MCH95490.1[Trifolium Phenylpropanoid CCR medium borderline
MCH98281.1[Trifolium Phenylpropanoid CCR medium borderline
MCH99900.1[Trifolium Phenylpropanoid CCR medium borderline
MCI05903.1[Trifolium Phenylpropanoid CCR medium pass
MCI07047.1[Trifolium Phenylpropanoid CCR medium borderline
MCI07683.1[Trifolium Phenylpropanoid CCR medium pass
MCI10921.1[Trifolium Phenylpropanoid CCR medium borderline
MCI20182.1[Trifolium Phenylpropanoid CCR medium pass
MCI20797.1[Trifolium Phenylpropanoid CCR medium borderline
MCI26868.1[Trifolium Phenylpropanoid CCR medium pass
MCI37051.1[Trifolium Phenylpropanoid CCR medium borderline
MCI75324.1[Trifolium Phenylpropanoid CCR medium borderline
MCH83608.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCH94595.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCH95222.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCI27410.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCI30497.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCI30798.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCI37449.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI43650.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCI47744.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI52076.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI52693.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI54900.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI59383.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI83178.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI87673.1[Trifolium Phenylpropanoid CCoAOMT low borderline
MCI95214.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCI96331.1[Trifolium Phenylpropanoid CCoAOMT medium pass
MCH79658.1[Trifolium Phenylpropanoid COMT medium pass
MCH81197.1[Trifolium Phenylpropanoid COMT medium pass
MCH81599.1[Trifolium Phenylpropanoid COMT low borderline
MCH85043.1[Trifolium Phenylpropanoid COMT medium pass
MCH93942.1[Trifolium Phenylpropanoid COMT medium pass