PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI61099.1[Trifolium Flavonoid F3H medium borderline
MCI62361.1[Trifolium Flavonoid F3H medium borderline
MCI87432.1[Trifolium Flavonoid F3H low borderline
MCI88231.1[Trifolium Flavonoid F3H medium borderline
MCI94910.1[Trifolium Flavonoid F3H medium borderline
MCI96375.1[Trifolium Flavonoid F3H medium borderline
MCH96237.1[Trifolium Flavonoid FLS medium borderline
MCH96795.1[Trifolium Flavonoid FLS medium borderline
MCH98540.1[Trifolium Flavonoid FLS medium borderline
MCH98549.1[Trifolium Flavonoid FLS medium borderline
MCI04707.1[Trifolium Flavonoid FLS medium borderline
MCI06594.1[Trifolium Flavonoid FLS medium borderline
MCI10663.1[Trifolium Flavonoid FLS medium borderline
MCI11079.1[Trifolium Flavonoid FLS medium borderline
MCI32439.1[Trifolium Flavonoid FLS medium borderline
MCI71875.1[Trifolium Flavonoid FLS low borderline
MCH81900.1[Trifolium Flavonoid FNS medium borderline
MCH88255.1[Trifolium Flavonoid FNS medium borderline
MCH89738.1[Trifolium Flavonoid FNS low borderline
MCH93807.1[Trifolium Flavonoid FNS medium pass
MCH95012.1[Trifolium Flavonoid FNS medium borderline
MCH97295.1[Trifolium Flavonoid FNS medium borderline
MCH97679.1[Trifolium Flavonoid FNS medium borderline
MCI02858.1[Trifolium Flavonoid FNS medium borderline
MCI03335.1[Trifolium Flavonoid FNS medium borderline
MCI06043.1[Trifolium Flavonoid FNS medium borderline
MCI12231.1[Trifolium Flavonoid FNS medium borderline
MCI15256.1[Trifolium Flavonoid FNS medium borderline
MCI16069.1[Trifolium Flavonoid FNS medium borderline
MCI16152.1[Trifolium Flavonoid FNS medium pass
MCI17855.1[Trifolium Flavonoid FNS low borderline
MCI18048.1[Trifolium Flavonoid FNS medium borderline
MCI22248.1[Trifolium Flavonoid FNS medium borderline
MCI30778.1[Trifolium Flavonoid FNS medium borderline
MCI43480.1[Trifolium Flavonoid FNS medium pass
MCI52166.1[Trifolium Flavonoid FNS low borderline
MCH90999.1[Trifolium Flavonoid IFR low borderline
MCH92594.1[Trifolium Flavonoid IFR medium pass
MCH96630.1[Trifolium Flavonoid IFR low borderline
MCH98696.1[Trifolium Flavonoid IFR low borderline
MCH99749.1[Trifolium Flavonoid IFR low borderline
MCI00087.1[Trifolium Flavonoid IFR low borderline
MCI00467.1[Trifolium Flavonoid IFR low borderline
MCI00943.1[Trifolium Flavonoid IFR medium pass
MCI06515.1[Trifolium Flavonoid IFR low borderline
MCI07695.1[Trifolium Flavonoid IFR low borderline
MCI08278.1[Trifolium Flavonoid IFR low borderline
MCI08800.1[Trifolium Flavonoid IFR low borderline
MCI10614.1[Trifolium Flavonoid IFR low borderline
MCI16650.1[Trifolium Flavonoid IFR medium pass