PlantSME Plant secondary metabolism enzyme database

Trifolium medium (trifolium_medium)

Imported from atlas release summary for Trifolium medium.

1815
Candidate Protein Records
1627
Pathway-Level Records
3129
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (92)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 17 UGT (175) View species results
Phenylpropanoid pathway 363 12 POD (147) View species results
Alkaloid pathway 359 22 NMT (90) View species results
Flavonoid pathway 207 14 UFGT (52) View species results
Rosmarinic acid pathway 142 7 4CL (51) View species results
Steroid pathway 95 10 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 977 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 201 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
MCI17639.1[Trifolium Flavonoid IFR low borderline
MCI17645.1[Trifolium Flavonoid IFR low borderline
MCI18338.1[Trifolium Flavonoid IFR low borderline
MCI18869.1[Trifolium Flavonoid IFR high pass
MCI23664.1[Trifolium Flavonoid IFR medium pass
MCI25194.1[Trifolium Flavonoid IFR medium pass
MCI31893.1[Trifolium Flavonoid IFR low borderline
MCI34726.1[Trifolium Flavonoid IFR medium pass
MCI35551.1[Trifolium Flavonoid IFR medium pass
MCI36828.1[Trifolium Flavonoid IFR low borderline
MCI49181.1[Trifolium Flavonoid IFR medium pass
MCI51503.1[Trifolium Flavonoid IFR medium pass
MCI53322.1[Trifolium Flavonoid IFR low borderline
MCI66567.1[Trifolium Flavonoid IFR medium pass
MCH79846.1[Trifolium Flavonoid IFS low borderline
MCH81831.1[Trifolium Flavonoid IFS low borderline
MCH84309.1[Trifolium Flavonoid IFS medium borderline
MCH84897.1[Trifolium Flavonoid IFS low borderline
MCH85301.1[Trifolium Flavonoid IFS low borderline
MCH85957.1[Trifolium Flavonoid IFS low borderline
MCH87066.1[Trifolium Flavonoid IFS low borderline
MCH89289.1[Trifolium Flavonoid IFS low borderline
MCH90602.1[Trifolium Flavonoid IFS medium borderline
MCH90827.1[Trifolium Flavonoid IFS low borderline
MCH91099.1[Trifolium Flavonoid IFS low borderline
MCH91203.1[Trifolium Flavonoid IFS low borderline
MCH91394.1[Trifolium Flavonoid IFS low borderline
MCH92120.1[Trifolium Flavonoid IFS medium borderline
MCH92387.1[Trifolium Flavonoid IFS low borderline
MCH92442.1[Trifolium Flavonoid IFS medium borderline
MCH93096.1[Trifolium Flavonoid IFS low borderline
MCH93475.1[Trifolium Flavonoid IFS low borderline
MCH93962.1[Trifolium Flavonoid IFS low borderline
MCH96344.1[Trifolium Flavonoid IFS low borderline
MCH97986.1[Trifolium Flavonoid IFS medium borderline
MCH98033.1[Trifolium Flavonoid IFS low borderline
MCH98112.1[Trifolium Flavonoid IFS low borderline
MCH98173.1[Trifolium Flavonoid IFS low borderline
MCH98465.1[Trifolium Flavonoid IFS medium borderline
MCH99182.1[Trifolium Flavonoid IFS low borderline
MCH99219.1[Trifolium Flavonoid IFS medium borderline
MCH99299.1[Trifolium Flavonoid IFS low borderline
MCH99411.1[Trifolium Flavonoid IFS low borderline
MCI00341.1[Trifolium Flavonoid IFS medium borderline
MCI00394.1[Trifolium Flavonoid IFS low borderline
MCI01678.1[Trifolium Flavonoid IFS medium borderline
MCI02775.1[Trifolium Flavonoid IFS medium borderline
MCI02881.1[Trifolium Flavonoid IFS low borderline
MCI03373.1[Trifolium Flavonoid IFS low borderline
MCI03645.1[Trifolium Flavonoid IFS low borderline