PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold4850391020 Alkaloid T3O low borderline
BceiScaffold4950393340 Alkaloid T3O medium borderline
BceiScaffold4950393350 Alkaloid T3O medium borderline
BceiScaffold4950393360 Alkaloid T3O medium borderline
BceiScaffold4950393370 Alkaloid T3O medium borderline
BceiScaffold50397220 Alkaloid T3O medium borderline
BceiScaffold5110406580 Alkaloid T3O medium borderline
BceiScaffold5470417220 Alkaloid T3O medium borderline
BceiScaffold560418330 Alkaloid T3O medium borderline
BceiScaffold570423460 Alkaloid T3O medium borderline
BceiScaffold590426800 Alkaloid T3O low borderline
BceiScaffold600433540 Alkaloid T3O medium borderline
BceiScaffold600433550 Alkaloid T3O medium borderline
BceiScaffold600434880 Alkaloid T3O medium borderline
BceiScaffold600435970 Alkaloid T3O medium pass
BceiScaffold600436110 Alkaloid T3O medium borderline
BceiScaffold630440510 Alkaloid T3O medium borderline
BceiScaffold640442450 Alkaloid T3O low borderline
BceiScaffold640443650 Alkaloid T3O medium borderline
BceiScaffold640444110 Alkaloid T3O medium pass
BceiScaffold640446100 Alkaloid T3O high pass
BceiScaffold640449330 Alkaloid T3O medium borderline
BceiScaffold640449340 Alkaloid T3O medium borderline
BceiScaffold650451950 Alkaloid T3O medium borderline
BceiScaffold650455190 Alkaloid T3O medium pass
BceiScaffold660459860 Alkaloid T3O medium pass
BceiScaffold710463550 Alkaloid T3O medium borderline
BceiScaffold710463710 Alkaloid T3O medium borderline
BceiScaffold710464080 Alkaloid T3O medium pass
BceiScaffold710464110 Alkaloid T3O medium pass
BceiScaffold720470420 Alkaloid T3O medium pass
BceiScaffold720470440 Alkaloid T3O low borderline
BceiScaffold720472760 Alkaloid T3O low borderline
BceiScaffold720472850 Alkaloid T3O medium borderline
BceiScaffold7590484540 Alkaloid T3O medium borderline
BceiScaffold7590484550 Alkaloid T3O medium borderline
BceiScaffold760484700 Alkaloid T3O medium borderline
BceiScaffold770485580 Alkaloid T3O medium borderline
BceiScaffold7750486130 Alkaloid T3O medium pass
BceiScaffold80497170 Alkaloid T3O medium borderline
BceiScaffold80502660 Alkaloid T3O medium pass
BceiScaffold810504370 Alkaloid T3O medium pass
BceiScaffold820505530 Alkaloid T3O medium pass
BceiScaffold820505970 Alkaloid T3O medium borderline
BceiScaffold820506010 Alkaloid T3O medium borderline
BceiScaffold820506070 Alkaloid T3O medium borderline
BceiScaffold8260506420 Alkaloid T3O medium borderline
BceiScaffold890514950 Alkaloid T3O medium borderline
BceiScaffold890514960 Alkaloid T3O medium borderline
BceiScaffold890515340 Alkaloid T3O medium borderline