PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold210172650 Terpenoid FPPS low borderline
BceiScaffold2120176070 Terpenoid FPPS low borderline
BceiScaffold250228010 Terpenoid FPPS medium pass
BceiScaffold2580246320 Terpenoid FPPS medium pass
BceiScaffold3820324840 Terpenoid FPPS low borderline
BceiScaffold3820324850 Terpenoid FPPS medium pass
BceiScaffold3820324860 Terpenoid FPPS low borderline
BceiScaffold3820324880 Terpenoid FPPS low borderline
BceiScaffold4850390260 Terpenoid FPPS medium pass
BceiScaffold4850390290 Terpenoid FPPS medium pass
BceiScaffold5000401650 Terpenoid FPPS low borderline
BceiScaffold660455580 Terpenoid FPPS medium pass
BceiScaffold1060025900 Terpenoid GGPPS medium borderline
BceiScaffold1170051700 Terpenoid GGPPS medium borderline
BceiScaffold1170054120 Terpenoid GGPPS medium borderline
BceiScaffold1170054130 Terpenoid GGPPS medium pass
BceiScaffold14190090290 Terpenoid GGPPS medium borderline
BceiScaffold2530235360 Terpenoid GGPPS medium borderline
BceiScaffold3820324810 Terpenoid GGPPS medium borderline
BceiScaffold3820324820 Terpenoid GGPPS medium borderline
BceiScaffold3820324890 Terpenoid GGPPS medium borderline
BceiScaffold3820324900 Terpenoid GGPPS medium borderline
BceiScaffold3820324910 Terpenoid GGPPS medium borderline
BceiScaffold3820324970 Terpenoid GGPPS medium borderline
BceiScaffold3820325060 Terpenoid GGPPS medium borderline
BceiScaffold3820325070 Terpenoid GGPPS medium borderline
BceiScaffold3820325080 Terpenoid GGPPS medium borderline
BceiScaffold3920329510 Terpenoid GGPPS medium borderline
BceiScaffold430363900 Terpenoid GGPPS medium borderline
BceiScaffold4460370660 Terpenoid GGPPS medium borderline
BceiScaffold600435220 Terpenoid GGPPS medium borderline
BceiScaffold660460230 Terpenoid GGPPS medium borderline
BceiScaffold770485140 Terpenoid GGPPS medium borderline
BceiScaffold770485150 Terpenoid GGPPS medium borderline
BceiScaffold80498570 Terpenoid GGPPS medium borderline
BceiScaffold1450098570 Terpenoid GPPS medium borderline
BceiScaffold2260197830 Terpenoid GPPS medium pass
BceiScaffold1060022770 Terpenoid HDR/IspH high pass
BceiScaffold15480108740 Terpenoid HDR/IspH high pass
BceiScaffold2530235760 Terpenoid HDR/IspH low borderline
BceiScaffold650453170 Terpenoid HDR/IspH high pass
BceiScaffold720469260 Terpenoid HDR/IspH medium pass
BceiScaffold720469270 Terpenoid HDR/IspH medium pass
BceiScaffold1450096700 Terpenoid HDS/IspG high pass
BceiScaffold2230192170 Terpenoid HDS/IspG medium pass
BceiScaffold2230192180 Terpenoid HDS/IspG medium pass
BceiScaffold2230192190 Terpenoid HDS/IspG medium pass
BceiScaffold1030011160 Terpenoid HMGR medium pass
BceiScaffold1060021270 Terpenoid HMGR medium pass
BceiScaffold22590197660 Terpenoid HMGR medium pass