PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2991
Candidate Protein Records
2549
Pathway-Level Records
6334
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BceiScaffold2580244990 Terpenoid HMGR low borderline
BceiScaffold3670318460 Terpenoid HMGR medium pass
BceiScaffold4850390510 Terpenoid HMGR medium pass
BceiScaffold650454640 Terpenoid HMGR medium pass
BceiScaffold790490650 Terpenoid HMGR medium pass
BceiScaffold900519380 Terpenoid HMGR medium pass
BceiScaffold11650051200 Terpenoid HMGS high pass
BceiScaffold2200182830 Terpenoid HMGS high pass
BceiScaffold3850326280 Terpenoid HMGS high pass
BceiScaffold640443980 Terpenoid HMGS high pass
BceiScaffold890514700 Terpenoid HMGS high pass
BceiScaffold21930179350 Terpenoid IDI medium pass
BceiScaffold3170289260 Terpenoid IDI medium pass
BceiScaffold4880391730 Terpenoid IDI medium pass
BceiScaffold4880391740 Terpenoid IDI medium pass
BceiScaffold1060027470 Terpenoid MCT/IspD low borderline
BceiScaffold4840388590 Terpenoid MCT/IspD high pass
BceiScaffold720473440 Terpenoid MCT/IspD low borderline
BceiScaffold2200183680 Terpenoid MDS/IspF high pass
BceiScaffold640445030 Terpenoid MDS/IspF high pass
BceiScaffold890513620 Terpenoid MDS/IspF low borderline
BceiScaffold890513630 Terpenoid MDS/IspF high pass
BceiScaffold10410014210 Terpenoid MVD low borderline
BceiScaffold4000344280 Terpenoid MVD medium pass
BceiScaffold660455790 Terpenoid MVD low borderline
BceiScaffold790488630 Terpenoid MVD low borderline
BceiScaffold790488670 Terpenoid MVD medium pass
BceiScaffold10004570 Terpenoid MVK low borderline
BceiScaffold1060021420 Terpenoid MVK low borderline
BceiScaffold1670124600 Terpenoid MVK medium pass
BceiScaffold1670124610 Terpenoid MVK medium pass
BceiScaffold240213980 Terpenoid MVK low borderline
BceiScaffold2200180390 Terpenoid PMK medium pass
BceiScaffold890518080 Terpenoid PMK medium pass
BceiScaffold890518090 Terpenoid PMK medium pass
BceiScaffold11870054950 Terpenoid TPS medium pass
BceiScaffold1250062820 Terpenoid TPS medium pass
BceiScaffold1250062830 Terpenoid TPS medium pass
BceiScaffold1340078280 Terpenoid TPS medium pass
BceiScaffold1340078290 Terpenoid TPS medium pass
BceiScaffold1340078300 Terpenoid TPS medium pass
BceiScaffold1340078310 Terpenoid TPS medium pass
BceiScaffold1340078320 Terpenoid TPS medium pass
BceiScaffold1340078330 Terpenoid TPS medium pass
BceiScaffold1340078340 Terpenoid TPS medium pass
BceiScaffold1340078350 Terpenoid TPS medium pass
BceiScaffold1340078360 Terpenoid TPS medium pass
BceiScaffold1340078370 Terpenoid TPS medium pass
BceiScaffold1340078390 Terpenoid TPS medium pass
BceiScaffold1490102560 Terpenoid TPS medium pass