PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
BceiScaffold5000399350 Flavonoid 4CL medium pass
BceiScaffold5150407050 Flavonoid 4CL medium pass
BceiScaffold590429050 Flavonoid 4CL medium pass
BceiScaffold640441680 Flavonoid 4CL medium pass
BceiScaffold640445690 Flavonoid 4CL low borderline
BceiScaffold650451860 Flavonoid 4CL low borderline
BceiScaffold650451870 Flavonoid 4CL medium pass
BceiScaffold710464990 Flavonoid 4CL medium pass
BceiScaffold710465550 Flavonoid 4CL medium pass
BceiScaffold80495480 Flavonoid 4CL low borderline
BceiScaffold80497820 Flavonoid 4CL medium pass
BceiScaffold890512990 Flavonoid 4CL medium pass
BceiScaffold890514210 Flavonoid 4CL medium pass
BceiScaffold890518210 Flavonoid 4CL medium pass
BceiScaffold9750526250 Flavonoid 4CL medium pass
BceiScaffold1030010490 Flavonoid ANR medium borderline
BceiScaffold1060021170 Flavonoid ANR low borderline
BceiScaffold1070028180 Flavonoid ANR medium borderline
BceiScaffold1140043360 Flavonoid ANR low borderline
BceiScaffold11510048150 Flavonoid ANR medium borderline
BceiScaffold13290076400 Flavonoid ANR medium borderline
BceiScaffold13290076420 Flavonoid ANR medium borderline
BceiScaffold1420091880 Flavonoid ANR low borderline
BceiScaffold1560111580 Flavonoid ANR medium borderline
BceiScaffold1740137820 Flavonoid ANR low borderline
BceiScaffold1890150900 Flavonoid ANR medium borderline
BceiScaffold1920154480 Flavonoid ANR medium borderline
BceiScaffold2110174130 Flavonoid ANR medium borderline
BceiScaffold2310207980 Flavonoid ANR medium borderline
BceiScaffold2310207990 Flavonoid ANR medium borderline
BceiScaffold250231220 Flavonoid ANR medium borderline
BceiScaffold250231230 Flavonoid ANR medium borderline
BceiScaffold2580237720 Flavonoid ANR medium borderline
BceiScaffold2580238920 Flavonoid ANR medium borderline
BceiScaffold2580240940 Flavonoid ANR medium borderline
BceiScaffold2830265610 Flavonoid ANR medium borderline
BceiScaffold2830265620 Flavonoid ANR medium borderline
BceiScaffold2830265630 Flavonoid ANR medium borderline
BceiScaffold30277630 Flavonoid ANR medium borderline
BceiScaffold30277650 Flavonoid ANR medium borderline
BceiScaffold30278990 Flavonoid ANR medium pass
BceiScaffold3200291120 Flavonoid ANR low borderline
BceiScaffold360312220 Flavonoid ANR low borderline
BceiScaffold3640314870 Flavonoid ANR medium borderline
BceiScaffold5150407160 Flavonoid ANR medium borderline
BceiScaffold590430200 Flavonoid ANR medium borderline
BceiScaffold620437590 Flavonoid ANR medium borderline
BceiScaffold740477330 Flavonoid ANR low borderline
BceiScaffold80502290 Flavonoid ANR medium borderline
BceiScaffold100006880 Flavonoid ANS/LDOX medium borderline