PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
BceiScaffold1050017100 Flavonoid ANS/LDOX medium borderline
BceiScaffold1050017120 Flavonoid ANS/LDOX medium borderline
BceiScaffold110035600 Flavonoid ANS/LDOX low borderline
BceiScaffold1160049010 Flavonoid ANS/LDOX low borderline
BceiScaffold1170053470 Flavonoid ANS/LDOX medium pass
BceiScaffold1170053560 Flavonoid ANS/LDOX medium borderline
BceiScaffold1170053600 Flavonoid ANS/LDOX medium borderline
BceiScaffold1170053640 Flavonoid ANS/LDOX medium borderline
BceiScaffold1170053840 Flavonoid ANS/LDOX medium borderline
BceiScaffold1170054310 Flavonoid ANS/LDOX medium pass
BceiScaffold1400086250 Flavonoid ANS/LDOX medium borderline
BceiScaffold140084190 Flavonoid ANS/LDOX medium borderline
BceiScaffold1560111360 Flavonoid ANS/LDOX medium borderline
BceiScaffold22210190790 Flavonoid ANS/LDOX medium pass
BceiScaffold2280200270 Flavonoid ANS/LDOX low borderline
BceiScaffold240211860 Flavonoid ANS/LDOX medium pass
BceiScaffold24260215370 Flavonoid ANS/LDOX medium borderline
BceiScaffold2580242780 Flavonoid ANS/LDOX medium borderline
BceiScaffold30280320 Flavonoid ANS/LDOX medium borderline
BceiScaffold3110288260 Flavonoid ANS/LDOX medium borderline
BceiScaffold3110288310 Flavonoid ANS/LDOX medium borderline
BceiScaffold400341590 Flavonoid ANS/LDOX medium borderline
BceiScaffold4920393040 Flavonoid ANS/LDOX medium borderline
BceiScaffold50397680 Flavonoid ANS/LDOX low borderline
BceiScaffold5150407010 Flavonoid ANS/LDOX medium pass
BceiScaffold660459540 Flavonoid ANS/LDOX medium pass
BceiScaffold770485630 Flavonoid ANS/LDOX low borderline
BceiScaffold80498990 Flavonoid ANS/LDOX medium borderline
BceiScaffold80502450 Flavonoid ANS/LDOX medium borderline
BceiScaffold1410089990 Flavonoid C4H medium borderline
BceiScaffold1470100260 Flavonoid C4H medium borderline
BceiScaffold1670120100 Flavonoid C4H medium borderline
BceiScaffold1690131170 Flavonoid C4H medium borderline
BceiScaffold17130134860 Flavonoid C4H low borderline
BceiScaffold2050164940 Flavonoid C4H medium borderline
BceiScaffold22810201530 Flavonoid C4H medium borderline
BceiScaffold25070233100 Flavonoid C4H medium borderline
BceiScaffold25920248190 Flavonoid C4H medium borderline
BceiScaffold2750259780 Flavonoid C4H medium borderline
BceiScaffold310287790 Flavonoid C4H medium borderline
BceiScaffold330299670 Flavonoid C4H medium borderline
BceiScaffold4120352650 Flavonoid C4H low borderline
BceiScaffold4310365150 Flavonoid C4H medium borderline
BceiScaffold5020402550 Flavonoid C4H medium pass
BceiScaffold540415670 Flavonoid C4H low borderline
BceiScaffold890514990 Flavonoid C4H low borderline
BceiScaffold1120040300 Flavonoid CHI medium pass
BceiScaffold14040089280 Flavonoid CHI medium pass
BceiScaffold26620255240 Flavonoid CHI medium pass
BceiScaffold4100350410 Flavonoid CHI medium pass