PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
BceiScaffold1400086500 Rosmarinic Acid C4H low borderline
BceiScaffold1400086520 Rosmarinic Acid C4H low borderline
BceiScaffold1400086530 Rosmarinic Acid C4H low borderline
BceiScaffold1410089740 Rosmarinic Acid C4H low borderline
BceiScaffold1410089750 Rosmarinic Acid C4H low borderline
BceiScaffold1410089760 Rosmarinic Acid C4H low borderline
BceiScaffold1410089770 Rosmarinic Acid C4H low borderline
BceiScaffold1410089990 Rosmarinic Acid C4H low borderline
BceiScaffold14160090190 Rosmarinic Acid C4H low borderline
BceiScaffold14160090210 Rosmarinic Acid C4H low borderline
BceiScaffold1440093940 Rosmarinic Acid C4H low borderline
BceiScaffold1440094320 Rosmarinic Acid C4H low borderline
BceiScaffold1440094940 Rosmarinic Acid C4H low borderline
BceiScaffold1450097670 Rosmarinic Acid C4H low borderline
BceiScaffold1470100260 Rosmarinic Acid C4H medium pass
BceiScaffold1560109770 Rosmarinic Acid C4H medium pass
BceiScaffold1560109780 Rosmarinic Acid C4H low borderline
BceiScaffold1560109790 Rosmarinic Acid C4H low borderline
BceiScaffold1560109800 Rosmarinic Acid C4H low borderline
BceiScaffold1560109810 Rosmarinic Acid C4H low borderline
BceiScaffold1560109820 Rosmarinic Acid C4H low borderline
BceiScaffold1560109830 Rosmarinic Acid C4H medium pass
BceiScaffold1560109840 Rosmarinic Acid C4H medium pass
BceiScaffold1560110930 Rosmarinic Acid C4H low borderline
BceiScaffold15650113440 Rosmarinic Acid C4H low borderline
BceiScaffold15790113980 Rosmarinic Acid C4H low borderline
BceiScaffold1600115740 Rosmarinic Acid C4H low borderline
BceiScaffold16240116790 Rosmarinic Acid C4H low borderline
BceiScaffold1640118780 Rosmarinic Acid C4H low borderline
BceiScaffold1640118810 Rosmarinic Acid C4H low borderline
BceiScaffold1670120100 Rosmarinic Acid C4H medium pass
BceiScaffold1670120110 Rosmarinic Acid C4H low borderline
BceiScaffold1670120130 Rosmarinic Acid C4H low borderline
BceiScaffold1680127320 Rosmarinic Acid C4H low borderline
BceiScaffold1680127340 Rosmarinic Acid C4H medium pass
BceiScaffold1680127350 Rosmarinic Acid C4H low borderline
BceiScaffold16900131300 Rosmarinic Acid C4H medium pass
BceiScaffold1690131170 Rosmarinic Acid C4H low borderline
BceiScaffold1700132280 Rosmarinic Acid C4H low borderline
BceiScaffold17130134860 Rosmarinic Acid C4H low borderline
BceiScaffold1740138230 Rosmarinic Acid C4H low borderline
BceiScaffold1820144190 Rosmarinic Acid C4H medium pass
BceiScaffold1820145030 Rosmarinic Acid C4H low borderline
BceiScaffold1840146220 Rosmarinic Acid C4H medium pass
BceiScaffold1840146320 Rosmarinic Acid C4H low borderline
BceiScaffold1840146330 Rosmarinic Acid C4H low borderline
BceiScaffold18580147020 Rosmarinic Acid C4H low borderline
BceiScaffold1870147550 Rosmarinic Acid C4H low borderline
BceiScaffold1870147560 Rosmarinic Acid C4H medium pass
BceiScaffold18770148040 Rosmarinic Acid C4H medium pass