PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
BceiScaffold1890149140 Rosmarinic Acid C4H low borderline
BceiScaffold1890150130 Rosmarinic Acid C4H low borderline
BceiScaffold1890150180 Rosmarinic Acid C4H low borderline
BceiScaffold1890150190 Rosmarinic Acid C4H low borderline
BceiScaffold1890151000 Rosmarinic Acid C4H low borderline
BceiScaffold19190153990 Rosmarinic Acid C4H low borderline
BceiScaffold1920154150 Rosmarinic Acid C4H medium pass
BceiScaffold1960157270 Rosmarinic Acid C4H low borderline
BceiScaffold20161260 Rosmarinic Acid C4H medium pass
BceiScaffold2020163740 Rosmarinic Acid C4H low borderline
BceiScaffold2020163760 Rosmarinic Acid C4H low borderline
BceiScaffold2020163770 Rosmarinic Acid C4H medium pass
BceiScaffold2050164940 Rosmarinic Acid C4H low borderline
BceiScaffold210169910 Rosmarinic Acid C4H medium pass
BceiScaffold210169920 Rosmarinic Acid C4H medium pass
BceiScaffold210171530 Rosmarinic Acid C4H low borderline
BceiScaffold2110174320 Rosmarinic Acid C4H low borderline
BceiScaffold2120176120 Rosmarinic Acid C4H low borderline
BceiScaffold2120176130 Rosmarinic Acid C4H low borderline
BceiScaffold2150177670 Rosmarinic Acid C4H medium pass
BceiScaffold2150177680 Rosmarinic Acid C4H low borderline
BceiScaffold2200179800 Rosmarinic Acid C4H low borderline
BceiScaffold2200180290 Rosmarinic Acid C4H medium pass
BceiScaffold2200180300 Rosmarinic Acid C4H medium pass
BceiScaffold2200181040 Rosmarinic Acid C4H low borderline
BceiScaffold2200182300 Rosmarinic Acid C4H low borderline
BceiScaffold2200182310 Rosmarinic Acid C4H medium pass
BceiScaffold2200184700 Rosmarinic Acid C4H low borderline
BceiScaffold22270191110 Rosmarinic Acid C4H medium pass
BceiScaffold22270191120 Rosmarinic Acid C4H medium pass
BceiScaffold22270191130 Rosmarinic Acid C4H medium pass
BceiScaffold2230192900 Rosmarinic Acid C4H low borderline
BceiScaffold2230192920 Rosmarinic Acid C4H low borderline
BceiScaffold2230193320 Rosmarinic Acid C4H low borderline
BceiScaffold2230194640 Rosmarinic Acid C4H low borderline
BceiScaffold2230196150 Rosmarinic Acid C4H medium pass
BceiScaffold22680199560 Rosmarinic Acid C4H low borderline
BceiScaffold2270199610 Rosmarinic Acid C4H low borderline
BceiScaffold2270199620 Rosmarinic Acid C4H low borderline
BceiScaffold22810201530 Rosmarinic Acid C4H low borderline
BceiScaffold2300203720 Rosmarinic Acid C4H low borderline
BceiScaffold2300203730 Rosmarinic Acid C4H medium pass
BceiScaffold2300204320 Rosmarinic Acid C4H low borderline
BceiScaffold2300204460 Rosmarinic Acid C4H low borderline
BceiScaffold2320208360 Rosmarinic Acid C4H low borderline
BceiScaffold23290208770 Rosmarinic Acid C4H low borderline
BceiScaffold23290208780 Rosmarinic Acid C4H low borderline
BceiScaffold23290208800 Rosmarinic Acid C4H low borderline
BceiScaffold23650209990 Rosmarinic Acid C4H low borderline
BceiScaffold23650210000 Rosmarinic Acid C4H low borderline