PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BceiScaffold2300204320 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2320208360 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2320208430 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold23290208770 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold23290208780 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold23290208820 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold23650209990 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold23650210000 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold23870210900 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold23870210910 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2410214880 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold24310216650 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold24310216680 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2460218650 Phenylpropanoid C3'H/CYP98A high pass
BceiScaffold2460218670 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2460218700 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2490222680 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold250224430 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold250224440 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold250225110 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold250227090 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold250227580 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold250227870 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold250228960 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold25070233100 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2580239200 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2580239210 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2580239220 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2580240160 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2580241220 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2580247740 Phenylpropanoid C3'H/CYP98A medium pass
BceiScaffold26580255010 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255020 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255040 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255050 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255060 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255070 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255080 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold26580255090 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold26620255250 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2700256860 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold280261430 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2830262150 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2830262160 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2830264200 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2830265000 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2830265260 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2830265410 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2840267810 Phenylpropanoid C3'H/CYP98A medium pass
BceiScaffold2850268180 Phenylpropanoid C3'H/CYP98A low borderline