PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BceiScaffold2850268190 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2930271510 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2930271530 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold2930271680 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2930272250 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2950272520 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold2950272570 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold30273990 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold30275030 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold30275040 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold30276000 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold30277790 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold30278030 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold30278440 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3030285370 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3200291040 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3200291050 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3200291060 Phenylpropanoid C3'H/CYP98A high pass
BceiScaffold3200291070 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3200291090 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3210293300 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3240295530 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3240295580 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3290299250 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3290299260 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold330299670 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3410303600 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3440303890 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3440304090 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3500305430 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold350305060 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3550306170 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold360308640 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold360308650 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold360308660 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold360310540 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3640315190 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3640317670 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3670318580 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3720320630 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3780322700 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3850325910 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3920329620 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3920329810 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3970331390 Phenylpropanoid C3'H/CYP98A medium borderline
BceiScaffold3990331770 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3990331780 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold3990331790 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold400342980 Phenylpropanoid C3'H/CYP98A low borderline
BceiScaffold4010345300 Phenylpropanoid C3'H/CYP98A low borderline