PlantSME Plant secondary metabolism enzyme database

Bombax ceiba (bombax_ceiba)

Imported from atlas release summary for Bombax ceiba.

2549
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 774 21 BAHD (273) View species results
Phenylpropanoid pathway 551 11 POD (204) View species results
Alkaloid pathway 541 24 7DLGT (105) View species results
Flavonoid pathway 313 13 UFGT (186) View species results
Rosmarinic acid pathway 212 7 C4H (83) View species results
Steroid pathway 158 12 CAS (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2500 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BceiScaffold40340360 Steroid CPD/CYP90A1 low borderline
BceiScaffold40340370 Steroid CPD/CYP90A1 low borderline
BceiScaffold430362430 Steroid CPD/CYP90A1 low borderline
BceiScaffold4330365450 Steroid CPD/CYP90A1 low borderline
BceiScaffold4740380190 Steroid CPD/CYP90A1 low borderline
BceiScaffold540414030 Steroid CPD/CYP90A1 low borderline
BceiScaffold570423460 Steroid CPD/CYP90A1 low borderline
BceiScaffold640443740 Steroid CPD/CYP90A1 low borderline
BceiScaffold710464110 Steroid CPD/CYP90A1 low borderline
BceiScaffold820505970 Steroid CPD/CYP90A1 medium borderline
BceiScaffold4120352220 Steroid CPI1 high pass
BceiScaffold1380082310 Steroid CYP51G1 medium borderline
BceiScaffold1930154920 Steroid CYP51G1 medium borderline
BceiScaffold2320208360 Steroid CYP51G1 medium borderline
BceiScaffold3440304090 Steroid CYP51G1 medium borderline
BceiScaffold3670318580 Steroid CYP51G1 medium borderline
BceiScaffold3720320630 Steroid CYP51G1 medium borderline
BceiScaffold3920329810 Steroid CYP51G1 medium borderline
BceiScaffold4500371590 Steroid CYP51G1 medium borderline
BceiScaffold480381940 Steroid CYP51G1 medium borderline
BceiScaffold600436110 Steroid CYP51G1 medium borderline
BceiScaffold630439740 Steroid CYP51G1 medium borderline
BceiScaffold630439840 Steroid CYP51G1 medium borderline
BceiScaffold630439850 Steroid CYP51G1 medium borderline
BceiScaffold630439860 Steroid CYP51G1 medium borderline
BceiScaffold660459860 Steroid CYP51G1 medium borderline
BceiScaffold8260506420 Steroid CYP51G1 medium borderline
BceiScaffold90518970 Steroid CYP51G1 medium borderline
BceiScaffold100005880 Steroid CYP90D1 medium borderline
BceiScaffold1030012100 Steroid CYP90D1 medium borderline
BceiScaffold1250058960 Steroid CYP90D1 medium borderline
BceiScaffold1270066260 Steroid CYP90D1 low borderline
BceiScaffold1270066270 Steroid CYP90D1 low borderline
BceiScaffold1270066280 Steroid CYP90D1 low borderline
BceiScaffold1270069150 Steroid CYP90D1 low borderline
BceiScaffold1320073500 Steroid CYP90D1 medium borderline
BceiScaffold1370082020 Steroid CYP90D1 low borderline
BceiScaffold1440094320 Steroid CYP90D1 medium borderline
BceiScaffold1560110930 Steroid CYP90D1 medium borderline
BceiScaffold1700132280 Steroid CYP90D1 low borderline
BceiScaffold1820145030 Steroid CYP90D1 low borderline
BceiScaffold1820145040 Steroid CYP90D1 low borderline
BceiScaffold1840146320 Steroid CYP90D1 low borderline
BceiScaffold18770148040 Steroid CYP90D1 low borderline
BceiScaffold1960158860 Steroid CYP90D1 low borderline
BceiScaffold20161260 Steroid CYP90D1 low borderline
BceiScaffold2020163740 Steroid CYP90D1 low borderline
BceiScaffold2020163760 Steroid CYP90D1 low borderline
BceiScaffold2020163770 Steroid CYP90D1 low borderline
BceiScaffold22270191110 Steroid CYP90D1 low borderline